Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1257 150 1e-31 seq274 134 1e-26 >seq1257 Length=2089 Score = 150 bits (166), Expect = 1e-31 Identities = 301/438 (69%), Gaps = 11/438 (3%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | ||||||||| | || |||||||| | || ||| | || || |||||| Sbjct 508 GCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGGCGCATTCGCCTCCATTTTCTGGTTG 567 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || || |||||| Sbjct 568 AAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 627 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || |||| ||| || ||| | ||||||| || | || ||| || || || Sbjct 628 GGTCTGCACACTGACTTCGCTTGCCTACTATTCACAC---ACCTCAAGAACCGCCC--CG 682 Query 61678 G--AGGAGCGT-GTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | |||| ||| | |||| | || || || | |||||||| ||||| ||| Sbjct 683 GCAAGGA-CGTCATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAAGAATTCCTG 741 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATAT 61793 ||||| ||| ||||| | || | |||||||| | || | ||| ||| || || Sbjct 742 ACTGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAA-CGCCAACTTGATGAAGCAATACAT 800 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 || || || |||||||| || |||||| | | || | || | |||| | | Sbjct 801 CGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTAC 860 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||| | || || || | ||||||||| || || |||||||| Sbjct 861 CAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAA 920 Query 61914 ACGTGTAGGCGACTATCA 61931 ||||| || ||||| || Sbjct 921 GCGTGTCGGTGACTACCA 938 Score = 105 bits (116), Expect = 5e-18 Identities = 204/296 (69%), Gaps = 9/296 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||| ||||||||||| | || ||| |||| || Sbjct 36 ATCTGGCAAATGTACAAGAAGCACGAAGCATCCTTCTGGACTGCTGAAGAGATCGACCTG 95 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAA---- 61202 ||||| || | | |||||| | | | | ||| | | ||| || Sbjct 96 TCCAAGGATCTTCACGACTGGAACAACCGACTCAATGATGACGAGAAGTTCTTTGTCTCT 155 Query 61203 -ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 |||| | ||| | ||||||||||| |||||||| || ||||||||||| || | || | Sbjct 156 CACAT-TCTTGCC-TTCTTTGCCGCGTCGGACGGCATTGTCAATGAGAACCTAGTTGAGC 213 Query 61262 GTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | ||| ||| || || || | | |||||||| || |||||||| |||||||| Sbjct 214 GATTCAGCG-GCGAAGTTCAGATCCCTGAGGCGCGATGCTTCTACGGTTTCCAGATCATG 272 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| ||||||| |||| ||| | ||||| || || ||||||| ||| Sbjct 273 ATGGAGAACATCCACTCCGAGACTTACTCCCTGCTCATTGACACTTACATCAAGGA 328 >seq274 Length=11782 Score = 134 bits (148), Expect = 1e-26 Identities = 328/488 (67%), Gaps = 18/488 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | ||||||||||| || | |||||||||||||| || Sbjct 1855 TCGACGGTGAACTGGATAGGCGCAGCAGCCGCCTGAGTACGGAGATAGTACATGCCAGTT 1914 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 || || ||| ||| | ||||||||| | || |||| || | | | | ||||| Sbjct 1915 TTCAGACCAAGCTTCCAGCCGGTGAAATGCAT-GCTGGTAATCTTCCCCATAGTGGGCTC 1973 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||| || || | || || ||||||| | |||||| || || ||||| Sbjct 1974 TCTCATATGAATGTTTAGTGATTGGGATTGATCGACAAAGGCACCACGGTCAGCGGCCAT 2033 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312 | | ||| || || || ||||| ||||||||||| || || || || || Sbjct 2034 CTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAAAGAGCTTTGAGGT-CCG 2092 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || ||||| | ||||| ||| | |||||||| ||||| ||||| || || Sbjct 2093 CA---GGAATGTTTGGAATGTTCTGAATTGAACCACCTTCGGCAATGATGCGGTTCTTCA 2149 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATG 65428 | || ||||| | ||||| || | ||| | |||| |||||| | || | Sbjct 2150 TGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAAGGG----TTAACA 2205 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||||||||| | || |||||||| || ||||| || ||| ||| || ||| Sbjct 2206 ACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGATGTGTAGGGCTCGAAG 2265 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 |||| |||| || ||||| |||| ||| ||||| ||||| ||||| || ||||| Sbjct 2266 CATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAACTAACAAG 2325 Query 65549 GAGTTTCG 65556 |||||| Sbjct 2326 CTGTTTCG 2333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558580620160