Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 150 1e-31
seq274 134 1e-26
>seq1257
Length=2089
Score = 150 bits (166), Expect = 1e-31
Identities = 301/438 (69%), Gaps = 11/438 (3%)
Strand=Plus/Plus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | ||||||||| | || |||||||| | || ||| | || || ||||||
Sbjct 508 GCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGGCGCATTCGCCTCCATTTTCTGGTTG 567
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||||||||| |||||| ||| ||| | || || || ||||||
Sbjct 568 AAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 627
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677
|| |||| ||| || ||| | ||||||| || | || ||| || || ||
Sbjct 628 GGTCTGCACACTGACTTCGCTTGCCTACTATTCACAC---ACCTCAAGAACCGCCC--CG 682
Query 61678 G--AGGAGCGT-GTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734
| |||| ||| | |||| | || || || | |||||||| ||||| |||
Sbjct 683 GCAAGGA-CGTCATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAAGAATTCCTG 741
Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATAT 61793
||||| ||| ||||| | || | |||||||| | || | ||| ||| || ||
Sbjct 742 ACTGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAA-CGCCAACTTGATGAAGCAATACAT 800
Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853
|| || || |||||||| || |||||| | | || | || | |||| | |
Sbjct 801 CGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTAC 860
Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
||||| || || |||||||| | || || || | ||||||||| || || ||||||||
Sbjct 861 CAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAA 920
Query 61914 ACGTGTAGGCGACTATCA 61931
||||| || ||||| ||
Sbjct 921 GCGTGTCGGTGACTACCA 938
Score = 105 bits (116), Expect = 5e-18
Identities = 204/296 (69%), Gaps = 9/296 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| ||||| ||||||||||| | || ||| |||| ||
Sbjct 36 ATCTGGCAAATGTACAAGAAGCACGAAGCATCCTTCTGGACTGCTGAAGAGATCGACCTG 95
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAA---- 61202
||||| || | | |||||| | | | | ||| | | ||| ||
Sbjct 96 TCCAAGGATCTTCACGACTGGAACAACCGACTCAATGATGACGAGAAGTTCTTTGTCTCT 155
Query 61203 -ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|||| | ||| | ||||||||||| |||||||| || ||||||||||| || | || |
Sbjct 156 CACAT-TCTTGCC-TTCTTTGCCGCGTCGGACGGCATTGTCAATGAGAACCTAGTTGAGC 213
Query 61262 GTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| ||| ||| || || || | | |||||||| || |||||||| ||||||||
Sbjct 214 GATTCAGCG-GCGAAGTTCAGATCCCTGAGGCGCGATGCTTCTACGGTTTCCAGATCATG 272
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|||||||| ||||||| |||| ||| | ||||| || || ||||||| |||
Sbjct 273 ATGGAGAACATCCACTCCGAGACTTACTCCCTGCTCATTGACACTTACATCAAGGA 328
>seq274
Length=11782
Score = 134 bits (148), Expect = 1e-26
Identities = 328/488 (67%), Gaps = 18/488 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | ||||||||||| || | |||||||||||||| ||
Sbjct 1855 TCGACGGTGAACTGGATAGGCGCAGCAGCCGCCTGAGTACGGAGATAGTACATGCCAGTT 1914
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196
|| || ||| ||| | ||||||||| | || |||| || | | | | |||||
Sbjct 1915 TTCAGACCAAGCTTCCAGCCGGTGAAATGCAT-GCTGGTAATCTTCCCCATAGTGGGCTC 1973
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| ||| || || | || || ||||||| | |||||| || || |||||
Sbjct 1974 TCTCATATGAATGTTTAGTGATTGGGATTGATCGACAAAGGCACCACGGTCAGCGGCCAT 2033
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312
| | ||| || || || ||||| ||||||||||| || || || || ||
Sbjct 2034 CTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAAAGAGCTTTGAGGT-CCG 2092
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
|| ||||| | ||||| ||| | |||||||| ||||| ||||| || ||
Sbjct 2093 CA---GGAATGTTTGGAATGTTCTGAATTGAACCACCTTCGGCAATGATGCGGTTCTTCA 2149
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATG 65428
| || ||||| | ||||| || | ||| | |||| |||||| | || |
Sbjct 2150 TGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAAGGG----TTAACA 2205
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
|||||||||||||| | || |||||||| || ||||| || ||| ||| || |||
Sbjct 2206 ACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGATGTGTAGGGCTCGAAG 2265
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
|||| |||| || ||||| |||| ||| ||||| ||||| ||||| || |||||
Sbjct 2266 CATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAACTAACAAG 2325
Query 65549 GAGTTTCG 65556
||||||
Sbjct 2326 CTGTTTCG 2333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397558580620160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |