Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20sp._20EC12_20[genbank_20GCA_5F002120325.1_202017-05-11] 398 sequences; 37,551,009 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10 147 2e-30 seq1 143 2e-29 >seq10 Length=1071462 Score = 147 bits (162), Expect = 2e-30 Identities = 327/484 (68%), Gaps = 10/484 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | |||||| |||| || | |||||||||||||| ||| Sbjct 418844 TCGACGGTGAACTGGATAGGCGCAGCAGCTGCCTGAGTACGGAGATAGTACATGCCAGTC 418785 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 || || ||| ||| | ||||||||| | || |||| |||| | | | ||||| Sbjct 418784 TTCAGACCAAGCTTCCAGCCGGTGAAATGCAT-GCTGGTAATCTTGCCCATAGTGGGCTC 418726 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | ||||| ||||||| | |||||| || || ||||| Sbjct 418725 TCTCATGTGAATGTTTAGTGACTGGGATTGATCGACAAAGGCACCACGGTCAGCGGCCAT 418666 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACCT 65312 | | ||| || || || ||||| ||||||||||| || || || || | Sbjct 418665 CTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAAAGAGCTTTGAGGTCCG- 418607 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || ||||| | ||||| ||| | |||||||| ||||| ||||| || || Sbjct 418606 -AA--GGAATGTTTGGAATGTTCTGAATTGAACCACCTTCGGCAATGATGCGGTTCTTCA 418550 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || ||||| | ||||| || | ||| | || | ||| | | || | |||| Sbjct 418549 TGCTGTCAGACCAGAGACCCATGTCAACAAGGTCTTTGAGCAACCAAGGGTTAACAACTT 418490 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| | || |||||||| |||||||| |||||| ||| || ||| ||| Sbjct 418489 GGAACTCGCCAGCAAGGACACGACGAGAGTAGATGTTCGACGTGTAGGGCTCGAAGCATT 418430 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | |||| || ||||| |||| ||| ||||| ||||| ||||| || ||||| || Sbjct 418429 CGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATAGGAGCAACTAACAAGCTGT 418370 Query 65553 TTCG 65556 |||| Sbjct 418369 TTCG 418366 >seq1 Length=2525816 Score = 143 bits (158), Expect = 2e-29 Identities = 290/425 (68%), Gaps = 9/425 (2%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || |||||||| | || ||| | ||||| ||||||||||| ||||| Sbjct 592498 GTCGAGGGTATCTTCTTCAGTGGTGCATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGT 592439 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||||||||| |||||| ||| ||| | || || || || ||||| | || | Sbjct 592438 CTGATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTACACACT 592379 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG--AGGAGCGT- 61686 || || ||| | ||||||| || | || ||| || || ||| |||| ||| Sbjct 592378 GACTTCGCTTGCCTACTATTCACAC---ACCTCAAGAACCGCCC--CGGCAAGGA-CGTC 592325 Query 61687 GTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTG 61746 | |||| | || || || | |||||||||||||| ||||| || ||| || Sbjct 592324 ATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAGGAATTCCTGACCGAGGCTCTG 592265 Query 61747 CCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCC 61806 ||| | || | |||||||| | ||| ||| || || || || || ||| Sbjct 592264 CCCTGTGCTCTGCTGGGCATGAACGCCAATTTGATGAAGCAATACATCGAGTTCGTCGCC 592205 Query 61807 GACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 ||||| || |||||| | | || | || | |||| | | ||||| || || Sbjct 592204 GACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATCTACCAACCCCTTCGAC 592145 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926 |||||||| | ||||| || | ||||||||| || || |||||||| ||||| || ||| Sbjct 592144 TTCATGGAGAACATTTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 592085 Query 61927 TATCA 61931 || || Sbjct 592084 TACCA 592080 Score = 109 bits (120), Expect = 4e-19 Identities = 206/298 (69%), Gaps = 9/298 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||| ||||||||||| | || ||| |||| || Sbjct 592982 ATCTGGCAAATGTACAAGAAGCACGAAGCATCCTTCTGGACTGCTGAAGAGATCGACCTG 592923 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAA---- 61202 ||||| || | | |||||| | | | | ||| | | ||| || Sbjct 592922 TCCAAGGATCTTCACGACTGGAACAACCGACTCAATGATGACGAGAAGTTCTTTGTTTCT 592863 Query 61203 -ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 |||| | ||| | ||||||||||| |||||||| || ||||||||||| || | || | Sbjct 592862 CACAT-TCTTGCC-TTCTTTGCCGCGTCGGACGGCATTGTCAATGAGAACCTAGTTGAGC 592805 Query 61262 G-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | ||| ||| || || || | | |||||||| || |||||||| |||||||| Sbjct 592804 GATTTAGCG-GCGAAGTTCAGATCCCTGAGGCGCGATGCTTCTACGGTTTCCAGATCATG 592746 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| Sbjct 592745 ATGGAGAACATCCACTCCGAGACTTACTCCCTGCTCATTGACACCTACATCAAGGAGC 592688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566071546720