Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq134 419 4e-115
seq556 80.6 5e-13
>seq134
Length=8570
Score = 419 bits (464), Expect = 4e-115
Identities = 279/309 (90%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 2850 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2909
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2910 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2969
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| |||||||||| ||||| ||||| | ||||| | |
Sbjct 2970 GATGTTCTGGGCCGCACGCGCGTTACACTGACACAGCCAGCGAGT--CTTTCCTTGACAG 3027
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3028 AGATGTCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3087
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 3088 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3147
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3148 CCCTTTGTA 3156
>seq556
Length=183110
Score = 80.6 bits (88), Expect = 5e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 54 GCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAG 113
|||||||| | || || ||||||||| || ||||||| || |||||||||||||||||
Sbjct 100572 GCTTTGGCAGTATGCTGGTTTCTTAGAGAGATTATCGGCCCACGCCGATGGAAGTTTGAG 100631
Query 114 GCAATAACA 122
|||||||||
Sbjct 100632 GCAATAACA 100640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194686208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |