Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq85 309 2e-79 >seq85 Length=153405 Score = 309 bits (342), Expect = 2e-79 Identities = 769/1158 (66%), Gaps = 26/1158 (2%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| ||||| ||||| || || |||| ||| ||||| |||||||||| ||| Sbjct 96400 AAAGCATCGGCTAGACCCTGGACACCAACACCAATGGGGCGATGACGCATGTTGCTGTTG 96341 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 |||||||| |||||||||| |||| ||||||||||||||||| || || ||| Sbjct 96340 TGAGCCTCAGGCACAGGGTAGTGGTTGACATCGATAATGCGATTCAGGTTACGCACGACC 96281 Query 65927 ACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985 || | ||| ||| ||| | | |||||| | | | | | || Sbjct 96280 ACCTTGGTGATCTCGT-GCAGCTTCTGGAAATCGTACTCT------CCTT------TGTT 96234 Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045 | | | ||||| || ||||| || || || |||||||| || || | ||| || || Sbjct 96233 GTAGTCGACAAAGGATGGTAGGGCTAGCGAGGCTAGGTTGCATACGGCAACCTCATCGGG 96174 Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105 |||| ||||||| ||||| ||||| ||||| || ||| || ||||| | || | Sbjct 96173 AGCGCAGTACTCGATGATTTCAGTGCATAGATTGGAGCTGCGGATAGTGCCTAGGTTTTT 96114 Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165 || || ||||| ||||| || |||||||||| |||| | || |||||||||| Sbjct 96113 CTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGT 96054 Query 66166 TTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTAC 66224 |||| ||| | ||||||| ||| || | ||||| | ||| | || ||| | | Sbjct 96053 CTGGGCCTCGAGAATGGCGTACCACAGCTTCTGGGCCTTGATGGTAAG-ACGGCCACGGC 95995 Query 66225 CTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284 ||| | ||||| | || || || ||||| || || | || | || | Sbjct 95994 CTTCACTCTCGTACTTCTCATACAGAGCCTCGAACTCCTCGCCGTAGCAATCAGCTAGTC 95935 Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344 || |||| | || ||||| || | ||| | | | || ||| ||||| ||| | Sbjct 95934 CAGGGCACTCATTAGGGCACATGAGTGTCCAGTTGGCGTTCTTTTCGACACGCTTCATGA 95875 Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGT 66404 | ||||| || ||||| || || ||| ||||| || || || |||||| |||||| Sbjct 95874 ACAGATCGGGAATCCACAGTGCTAGGAACAGATCACGGGCACGAATCTCCTCCTTGCCGT 95815 Query 66405 GATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464 | || ||||||| || |||||||| || | ||||| ||||| || |||||||| |||| Sbjct 95814 GGTTCTTGCGCAGATCAAGGAACTCGAACACATCGGCGTGCCACGGCTCCAGGTAAATGG 95755 Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524 | || | || || ||| ||||| |||||||||||||| || |||||||||| Sbjct 95754 CAAAGGCACCGGGGCGCTTGTTACCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAGA 95695 Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584 |||||| ||| || || | |||||||| |||| |||||||| | ||| || || Sbjct 95694 CACGCAGCATGGGAACAATGCCGTTAGACGTGCCGTTGGTGCCAGCAATGTACGAGCCAG 95635 Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644 || || ||| ||| || |||||||| ||||| |||||| |||| ||||| ||||| Sbjct 95634 TGGCACGGATACGGTGGACGTTCAGACCGATACCGCCGGCCATCTTGGAGATCATAGCAC 95575 Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || || || | | || || |||||| ||| |||| || | ||| ||| Sbjct 95574 AAGTCTTCAGCGTATCGTAGATACCATCAATGCTGTCGTCCTTCATATCAACTAGGAAGC 95515 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 | || || |||| | |||||| | || ||| || ||||| | ||||| || | Sbjct 95514 ACGACGATAGCTGGGCCTGCGGTGTGCCAGCGTTGAATAGCGTGGGCGAGGCGTGTGTGA 95455 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 || | | || |||||||| ||||| ||||||| ||| |||| | || || | Sbjct 95454 AGAACTTGCTTGACATGTAGTTGTAAGTCTCGAGCACACGGTCAACGCGGTCACCCCAGA 95395 Query 66825 TCCCGA-GTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTT 66879 | || | | |||| ||||| | | || || || || ||||| | |||| || Sbjct 95394 TGCCAACGGCCACA-CGCATGATCATGTGCTGCGGACGCTCGACAATCTTGCCG-TCTAG 95337 Query 66880 GATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || | ||| || || || |||||||||| ||||||||| ||| ||||| || Sbjct 95336 CTTAAGC---AGGTACGAACGCTCTAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 95280 Query 66940 GTTAGCATGCACGATGGC 66957 | | | ||| ||||| Sbjct 95279 ACGATCGTACACAATGGC 95262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565281753040