Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1123 306 2e-80 >seq1123 Length=505 Score = 306 bits (338), Expect = 2e-80 Identities = 207/232 (89%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 274 TAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGTCCGCAGTTGC 333 Query 227 TCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGT 286 ||| |||| | | | |||| | |||||||||||| |||||||||||||| ||||||||| Sbjct 334 TCAGCCGGTCTCCTGACCGGCGTACTCTTCTGCGGCCAGGCCAGCATCAGTTCGGGCGGT 393 Query 287 CGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATG 346 ||||||||| || ||||||||| || || |||||| ||||||||||||||||||||||| Sbjct 394 CGGATAAAGACCTCGGGAATGTAGCTCCTCTCGGGGAGTGTTATAGCCCGGGGTGGAATG 453 Query 347 CGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGT 398 ||||| ||||||||||||| | |||| |||| ||||||||||||||||||| Sbjct 454 CGGCCAGCCTGGACTGAGGATCTCGCTTCGGCAAGGATGCTGGCGTAATGGT 505 Score = 138 bits (152), Expect = 5e-30 Identities = 81/84 (96%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 17 TAGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAG 76 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 TAGCCATGTGAATCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAG 184 Query 77 GTAAATTTCTTCTAAAGCTAAATA 100 |||||| ||||||||||||||||| Sbjct 185 GTAAATCTCTTCTAAAGCTAAATA 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079948884650