Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13]
2,383 sequences; 47,325,858 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1695 109 9e-22
seq1388 107 3e-21
>seq1695
Length=39698
Score = 109 bits (120), Expect = 9e-22
Identities = 80/92 (87%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||| ||||||||| |||||||||||||||| |||||
Sbjct 18766 TACTAAGCTGAATTACCATTGCAACGA-GGTCATCAGGAGGGTAAAACTAACCTATCTCA 18708
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
| ||| |||||||||||||| |||||||||
Sbjct 18707 CAATGGTTTAAACCCAGCTCACATTCCCTATT 18676
Score = 75.2 bits (82), Expect = 2e-11
Identities = 44/46 (96%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 17952 GTAACTTTTCTGGCACCTCTAGCCTCAAACCTCGAGGGACTAAAGG 17907
>seq1388
Length=582
Score = 107 bits (118), Expect = 3e-21
Identities = 65/69 (94%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 69 CACAATTCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACCTCGAGGGA 10
Query 255 CTAAAGGAT 263
|||||||||
Sbjct 9 CTAAAGGAT 1
Score = 107 bits (118), Expect = 3e-21
Identities = 59/59 (100%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854379639648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |