Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1963 253 2e-62 seq1786 136 3e-27 >seq1963 Length=539952 Score = 253 bits (280), Expect = 2e-62 Identities = 643/966 (67%), Gaps = 18/966 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||||| ||| || |||||||| ||||| | ||| ||||| || ||||||| Sbjct 429761 GGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATG 429820 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || || ||| ||||| |||| || | || || ||||| || Sbjct 429821 ATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTTTTTCTGGTTGCTCTTTCGG 429880 Query 66122 TT-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || || || || ||||| | |||| | || |||| ||||| || | ||| | ||| Sbjct 429881 TTCGCGTGG-TCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGAT 429939 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGTACCGC--CCTACCTTTGCGTTCG 66235 ||||| ||| | | ||||||| || || ||||| || |||| ||| Sbjct 429940 GGCGTACCACAACTTCTGGGCCTTCATGGTCTTGCG-ACCGCGGCCCTCCTTC----TCG 429994 Query 66236 TAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTG 66295 || | |||||||| || || ||||| | |||| || | || |||| Sbjct 429995 TACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAGTCCAGGGCACTCA 430054 Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 | || ||||| || | ||| || || | || || || || ||| || ||||| || Sbjct 430055 TTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCATGAACAGATCGGGG 430114 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 |||||||| || ||| ||||| || ||||| |||||| ||||||| || |||||| Sbjct 430115 ATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCTTGCGC 430174 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 | ||| || ||||| |||| ||| || |||||||| || |||||||| ||||| | || Sbjct 430175 AGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCG 430234 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 ||| ||| ||| || |||||||| || || || |||||| ||||| |||||||| Sbjct 430235 GGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGTATTGTTAAAGACCCGCAACATG 430294 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || || || || || |||| || || || ||||| || || || || ||| Sbjct 430295 GGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTATGAGCCGGTGGCACGGATA 430354 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGCCAC 66654 ||| || || || || ||||| || ||| |||| ||||| ||||| || | Sbjct 430355 CGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGC 430414 Query 66655 -TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAA 66713 |||| | | ||||| |||||| ||| |||| || | |||| |||| || | Sbjct 430415 GTGTC--GTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGATGACA 430472 Query 66714 GTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGC 66773 | ||||| | ||| ||| | || ||| | ||||| | ||||| || ||| | | | Sbjct 430473 GCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGAAGAACTTGT 430532 Query 66774 GAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG 66833 ||||| ||||||||||||||||| || | || || || || |||| | Sbjct 430533 TGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTCCCCAGATGCCGACAG 430592 Query 66834 C-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAG 66892 | ||| ||||| | | || ||| ||||| ||||| | | | | || | || | | Sbjct 430593 CGACA-CGCATGATCATGTGTTGTGGCCGCTCGACGACTTTACCGTCGAGCTTCAGCAGG 430651 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACG 66952 || ||||| || |||||||||| || ||||| ||| ||||||| ||| || Sbjct 430652 TATGAGCGCTCGAGGGTCTTGAAGCCGAAGTATTGGTAGCCGAAATCGCGGTCATAGACA 430711 Query 66953 ATGGCC 66958 |||||| Sbjct 430712 ATGGCC 430717 >seq1786 Length=271448 Score = 136 bits (150), Expect = 3e-27 Identities = 212/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| |||||||| |||||||| | |||||| | ||| | Sbjct 164866 ATCTGGCAAATGTACAAGAAGCACGAAGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 164925 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||| | ||| | | ||| || |||| |||| | Sbjct 164926 TCCAAGGACATGCACGACTGGAGCAACCGTCTGACCGA-CGACGAACGGTATTTTGTGTC 164984 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| || ||||| || || |||||||| ||||| | |||| || Sbjct 164985 CCACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTCGTGGAGCG 165044 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| || | | ||||| || || ||||||||||||||||| | Sbjct 165045 GTTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGA 165103 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| ||| | | ||||| ||||| ||||||| ||||| Sbjct 165104 TGGAGAACATCCACTCAGAGACATACTCTCTCCTCATTGATACCTACATCAAGGAGC 165160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397556453507120