Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25]
904 sequences; 59,495,866 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq607 480 1e-133
>seq607
Length=11868
Score = 480 bits (532), Expect = 1e-133
Identities = 297/315 (94%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct 5633 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 5574
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||
Sbjct 5573 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATACAT 5514
Query 125 TAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 5513 TAGCATGGAATAATAGAATAGGACGTCGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 5454
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct 5453 TAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATCGTCAGAGGTGAAATTCTTG 5394
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 5393 GATCGATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-G 5335
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 5334 AACGAAAGTTAGGGG 5320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915191726592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |