Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25]
904 sequences; 59,495,866 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq607 253 3e-65
>seq607
Length=11868
Score = 253 bits (280), Expect = 3e-65
Identities = 228/279 (82%), Gaps = 7/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 1037 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 980
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 979 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 920
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | |||| | |||| || | |||||| |||||| ||||||||||||||| || |
Sbjct 919 GAACGCGATGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 861
Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | |||| || |||| | | || | | | ||| ||||
Sbjct 860 CTTAGCAGGCGATTCCTCCGGCGGCC--TCGAAGTGGTCGTCGGT-AATTCGCGTATTGT 804
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | || | || ||| ||||||||||||||||||
Sbjct 803 AATTTGAACACGTGCGGGGTCAAATCCTTTGCAGACGAC 765
Score = 253 bits (280), Expect = 3e-65
Identities = 228/279 (82%), Gaps = 7/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 10882 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 10825
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 10824 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 10765
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | |||| | |||| || | |||||| |||||| ||||||||||||||| || |
Sbjct 10764 GAACGCGATGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 10706
Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | |||| || |||| | | || | | | ||| ||||
Sbjct 10705 CTTAGCAGGCGATTCCTCCGGCGGCC--TCGAAGTGGTCGTCGGT-AATTCGCGTATTGT 10649
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | || | || ||| ||||||||||||||||||
Sbjct 10648 AATTTGAACACGTGCGGGGTCAAATCCTTTGCAGACGAC 10610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192825856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |