Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq607 253 3e-65 >seq607 Length=11868 Score = 253 bits (280), Expect = 3e-65 Identities = 228/279 (82%), Gaps = 7/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 1037 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 980 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 979 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 920 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | |||| | |||| || | |||||| |||||| ||||||||||||||| || | Sbjct 919 GAACGCGATGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 861 Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | |||| || |||| | | || | | | ||| |||| Sbjct 860 CTTAGCAGGCGATTCCTCCGGCGGCC--TCGAAGTGGTCGTCGGT-AATTCGCGTATTGT 804 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | || | || ||| |||||||||||||||||| Sbjct 803 AATTTGAACACGTGCGGGGTCAAATCCTTTGCAGACGAC 765 Score = 253 bits (280), Expect = 3e-65 Identities = 228/279 (82%), Gaps = 7/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 10882 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 10825 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 10824 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 10765 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | |||| | |||| || | |||||| |||||| ||||||||||||||| || | Sbjct 10764 GAACGCGATGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 10706 Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | |||| || |||| | | || | | | ||| |||| Sbjct 10705 CTTAGCAGGCGATTCCTCCGGCGGCC--TCGAAGTGGTCGTCGGT-AATTCGCGTATTGT 10649 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | || | || ||| |||||||||||||||||| Sbjct 10648 AATTTGAACACGTGCGGGGTCAAATCCTTTGCAGACGAC 10610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192825856