Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq48 260 1e-64 seq56 158 1e-33 >seq48 Length=122101 Score = 260 bits (288), Expect = 1e-64 Identities = 546/805 (68%), Gaps = 8/805 (1%) Strand=Plus/Plus Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||| || |||| || || | |||||| || || | ||| || || || | ||||| | Sbjct 16371 GGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGGGCAGAGTACTCAAT 16430 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 || || ||||| || || || || ||||| |||| |||| || || ||||| || Sbjct 16431 GATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCG 16490 Query 66121 ATTG-CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 ||| | || |||||||||| |||| | || |||| |||||| || | ||| | | Sbjct 16491 GTTGGCGTGG-TCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAA 16549 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAA 66238 |||| | ||| || | ||||||| || | | | || | ||| | ||||| Sbjct 16550 TGGCATACCACAGCTTCTGGGCCTTCATGGT-CTTGCGACCACGACCCTCCTTCTCGTAC 16608 Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT 66298 || |||||||| || || ||||| | |||| || | ||||||| || Sbjct 16609 TGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTA 16668 Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || |||||||| | ||| ||||| | || || || || ||| || ||||| || ||| Sbjct 16669 GGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGGATC 16728 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 |||||||| ||| ||||| || ||||| |||||| | ||||| || ||||||| | Sbjct 16729 CAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGGTTCTTGCGCAGG 16788 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || |||||||| || | ||||| |||||||| || |||||||| ||||| | || | Sbjct 16789 TCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGA 16848 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| |||||| ||||||||||| || ||| ||||||||||| |||| ||| || Sbjct 16849 CGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGG 16908 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 | || ||||| | || || ||||| ||||| || || || || || | Sbjct 16909 GTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGG 16968 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGCCA-CTG 66656 || || ||||||||||| ||||| ||| |||| ||||| ||||||| || | || Sbjct 16969 TGCACGTTCAGACCAATTCCACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAGGTG 17028 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 || | ||||| |||||| ||| |||| ||| | |||| ||||||| || | Sbjct 17029 TC--ATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCT 17086 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 |||| | || ||| | || ||| | ||||| | || || || ||| | | | | Sbjct 17087 GGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTG 17146 Query 66777 ACATGTAATTGTACGTCTCGATGAC 66801 |||| ||||| ||||| ||||| Sbjct 17147 ACATCAGGTTGTAGGTCTCAATGAC 17171 Score = 127 bits (140), Expect = 2e-24 Identities = 325/481 (68%), Gaps = 24/481 (5%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | ||||| |||| || | || ||||||||||| ||| Sbjct 15466 TCGACAGTGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTC 15525 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGC 65194 ||||| || ||| ||| | ||| ||||| | || | || |||| || | ||| Sbjct 15526 TTGAGACCGAGCTT-CCAGCCGGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGAT-GGC 15582 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||| ||| | |||||| || |||||| Sbjct 15583 TCCCTCATGTGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCC 15642 Query 65255 ATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310 || | ||||| | | | || |||||||||||||||||||| ||| | | | | Sbjct 15643 ATCTGCACAATGGTCCTCTGA---GAGATCTCCCAGACGGTCTTGTAGAGG-GCCTTGAT 15698 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCA-CGACGTGCAATAATGCGATTAC 65369 ||| || || ||||| ||| | |||||| | || || || || || || Sbjct 15699 ATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCG-GCGATGATACGGTTCT 15757 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGAT----GTTGAACCAAGTGACGATTG 65425 ||| | ||| |||||||| || | || | |||| | || ||||| | ||| Sbjct 15758 TCATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGG----TTG 15813 Query 65426 ATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCA 65485 | ||| ||||||||||| | || ||||| || ||||||||||| ||| || ||| Sbjct 15814 ACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCA 15873 Query 65486 AAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAAC 65545 ||| | ||| ||||||| || || || | || || ||||| ||||| || || | |||| Sbjct 15874 AAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAAC 15933 Query 65546 A 65546 | Sbjct 15934 A 15934 >seq56 Length=117397 Score = 158 bits (174), Expect = 1e-33 Identities = 301/443 (68%), Gaps = 3/443 (1%) Strand=Plus/Minus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 ||| || | || || || | |||||||| | || ||||| || | || ||| | || Sbjct 53492 CGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCATT 53433 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| | ||||| ||||| || ||||| || ||||||||| ||| ||| | || || Sbjct 53432 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTCT 53373 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 || || ||||| |||| || || || | | || ||| | | ||| ||| Sbjct 53372 CGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCAC---CTGAGGAAC 53316 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 ||||| || ||||||| | || || | ||||| || | ||||| |||| Sbjct 53315 CGTCCAAGCAAGCAGCGTGTCGAGGACATCATCACCGAGGCCGTCGCCATCGAGAAGGAG 53256 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || ||||||| ||| |||| | | ||| |||||||||| | || ||| |||| Sbjct 53255 TTCTTGACTGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAGCAG 53196 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || ||||||||||||||||| |||||| | |||| | || | | || || Sbjct 53195 TACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAAGGTTTACAAG 53136 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 || ||||| || || |||||||| | || || || | ||||||||| || || || Sbjct 53135 TCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTT 53076 Query 61909 GAGAAACGTGTAGGCGACTATCA 61931 ||||| ||||| || ||||| || Sbjct 53075 GAGAAGCGTGTCGGTGACTACCA 53053 Score = 141 bits (156), Expect = 7e-29 Identities = 213/297 (72%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||||||||||||||| | |||||| ||||| | Sbjct 53955 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACTGCCGAGGAGATCGATCTC 53896 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| || | |||||| | || | | ||| || || | | | ||| | Sbjct 53895 TCCAAGGACCTGCACGACTGGAGCAACCGCCTGACCGA-CGACGAGCGATACTTCGTCTC 53837 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| || ||||| || || |||||||| ||||| | |||| || Sbjct 53836 CCACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAGCG 53777 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| || | | |||||||| || ||||||||||||||||| | Sbjct 53776 CTTCA-GCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 53718 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| |||| | |||||||| || ||||||| ||||| Sbjct 53717 TGGAGAACATCCACTCTGAGACGTACTCGCTGCTCATCGACACCTACATCAAGGAGC 53661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563619794560