Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq180 98.7 4e-15 >seq180 Length=76094 Score = 98.7 bits (108), Expect = 4e-15 Identities = 113/147 (77%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||| |||||||| | || | Sbjct 18861 CAATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATAATGTCAGGTGTAACACCTT 18920 Query 364485 CAGCG-GTAAAGGGCATATCTT-CGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| | || ||||| |||| | || || | | ||| |||||| || |||||||| | Sbjct 18921 C-GCGACTGAATGGCATGTCTTCCTGGCGGTAAG-TGACACCAATAGTGCCCTTTTGACC 18978 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||||||||||||||| ||||| Sbjct 18979 GTGACGAGAAGCAAACTTGTCACCAAT 19005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884864568303272