Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1150 102 3e-19 >seq1150 Length=120200 Score = 102 bits (112), Expect = 3e-19 Identities = 109/142 (77%), Gaps = 8/142 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTG---TTCTCCATGAGTCCCCCTTAGGACACC-TGCGT 62 |||||| ||||| |||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 74266 CTTTTGTTCTACTAACGATTTCTGCCCTTCTCCATGAGCCCCCCTTAGGACACCCTGCGT 74207 Query 63 TATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA----CCTGACAATGTCATCAA 118 | || ||||| || ||||||| |||||||||||||| | || |||||| ||| Sbjct 74206 TGTGCTTTAATGGAGTCGCCGCCCAAGCCAAACTCCCCATAGTGCCGATAATGTCCTCAG 74147 Query 119 CCCGGATCGGCCCGCGAAGGAC 140 || || | |||||| || ||| Sbjct 74146 CCTGGGTGCGCCCGCCAAAGAC 74125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635169405408