Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq503 461 2e-127 seq150 98.7 3e-18 >seq503 Length=3001 Score = 461 bits (510), Expect = 2e-127 Identities = 288/307 (94%), Gaps = 2/307 (1%) Strand=Plus/Minus Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCG 257 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2614 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCG 2555 Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATA 317 ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| Sbjct 2554 AGAAGTTATTATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATA 2495 Query 318 CACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCC 377 || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 2494 CATCCCTTCCGAAGTCGGGATTTTAAGCATGTATTAGCTCTAGAATTACCACGGTTATCC 2435 Query 378 ATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC 437 ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 2434 ATGTAGT-AGGTACTATCAAATATACGATAACTGATTTAATGAGCCATTCGCAGTTTCGC 2376 Query 438 TGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTA 497 || ||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2375 CGTTTAG-GTGCTTAAACTTAGACTTGCATGGCTTAATCTTTGAGACAAGCATATGACTA 2317 Query 498 CTGGCAG 504 ||||||| Sbjct 2316 CTGGCAG 2310 Score = 102 bits (112), Expect = 2e-19 Identities = 56/56 (100%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACT 56 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2755 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACT 2700 >seq150 Length=75369 Score = 98.7 bits (108), Expect = 3e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 50 TGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATG 109 |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| Sbjct 71607 TGTCACTACCTCCCCGAGTCGGGATTGGGCAATTTGCGCGCTTGCTGCCTTCCTTGGATG 71666 Query 110 TG 111 || Sbjct 71667 TG 71668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510371740416