Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20aspalathi_20[genbank_20GCA_5F001447215.1_202015-11-20] 1,871 sequences; 55,029,878 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1209 304 1e-77 seq561 118 8e-22 >seq1209 Length=374226 Score = 304 bits (336), Expect = 1e-77 Identities = 1236/1910 (65%), Gaps = 76/1910 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | || || |||| ||| | || ||||||||||| ||| Sbjct 94544 TCGACAGTGAACTGGATGGGTGCGGCTGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTC 94485 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGC 65194 ||||| || ||| ||| || ||| ||||| | || | || |||| || | ||| Sbjct 94484 TTGAGACCGAGCTT-CCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATGGAT-GGC 94428 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| ||| |||||| | ||||| || |||||| Sbjct 94427 TCTCGCATGTGGATGTTAAGTGACTGAGACTGGTCGATGAAGGCGCCACGGTCAGCAGCC 94368 Query 65255 ATGTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCT 65312 || | | || | | || || || |||||||||||||||||||| || | | | | Sbjct 94367 ATCTGCACAATT-GTCCTCTGAGAGATTTCCCAGACGGTCTTGTACAG-CGCCTTGATAT 94310 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCA-CGACGTGCAATAATGCGATTACGC 65371 || || || ||| | ||| || ||||| | || || || || || || | Sbjct 94309 CAGCCGGGATGCTGGGAATATTCTGCACGGAACCGTCCTCG-GCGATGATACGGTTCTTC 94251 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAA-CCAAGTGACGATTGAT 65427 || | ||| |||||||| || | || | || | ||| ||||| | |||| Sbjct 94250 ATGGCCTCAGACCACAAGCCAAGCTCTGTCAGGTCCCTGAGAAGCCAAGGG----TTGAC 94195 Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487 ||| ||||||||||| | || ||||| || ||||||||||| || || || || Sbjct 94194 GACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTATATGGCTCGAA 94135 Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | | || ||||||| || || || | || |||||||| |||||||| || | |||||| Sbjct 94134 GCACTCGTTGTTGCCCAGGATCTGCGAGGTGGATGCAGTAGGCATGGGTGCCATCAACAA 94075 Query 65548 TGAGTTTCGCAATCCGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACA 65603 ||| || | || || | || ||| ||| | ||||||||| ||||| Sbjct 94074 GCTGTTGCGAATACCAGTCTCCTTGATCTTGGCCTTGAGGG----CGTCCCAGTCCCACA 94019 Query 65604 TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTG 65659 | | | | | | | ||| |||||| || || ||| | || || || | Sbjct 94018 ---GGTCA--GAAGGCTTG-ACGTTCCACATGTCGAACTGGAGGATGCCCTGCGACACGG 93965 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAA-GTTGACAGCTGGT 65718 | | | || | | | | ||| || ||| ||||||||| || | | || | Sbjct 93964 GGCTG----CCCTCGTATGTCTTGTATGTGCCTTCCACCTTGGCAATGTCGCTGGATGCT 93909 Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATC 65778 | ||| || ||| || ||||||||||| || | || || ||||| ||||| Sbjct 93908 GT-GAGAGCAGCATGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGCGCCTCGGG 93850 Query 65779 GCTCTCGTACGGCATACCCATCAGGACAAAAGTG--TCGGCCAGACCTTGAACTCCAATA 65836 | ||| | ||||||| | | ||| | || ||||| ||||| ||||| || | | Sbjct 93849 GGAATCGAAGGGCATACGAAGA--GCCAAGAATGCATCGGCAAGACCCTGAACGCCGACA 93792 Query 65837 CCGATGGGACGATGACGCAAATTGGAAC-GTCTCGCCTCAGGTACAGGGTAGTAATTGAT 65895 || || || || || |||| ||| || | ||||| || ||||||| |||| Sbjct 93791 CCAATAGGTCGGTGTCGCATGTTGCTGTTGTAT-GCCTCCTTCACCGGGTAGTGGTTGAC 93733 Query 65896 ATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGA 65954 ||||||||| ||||| ||||| || || || || ||| ||| || | || Sbjct 93732 ATCGATAATCTTGTTCAAGTTGCGGACGACAACCTGAGTGACCTCGT-GCAGCTGCTGGA 93674 Query 65955 AATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014 | | | ||| | | | || | | | || | || || |||| | Sbjct 93673 AGT-------TGTAGCAG--TTGT---TGTCATAATCGACGTATGCCGGCAGAGCAATGG 93626 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 | || |||||||||||||| | ||| || || || | ||||||| || |||||||| | Sbjct 93625 AAGCCAGGTTGCAGACAGCGACCTCATCCGGGGCCGAGTACTCGATGATCTCGGTGCAGA 93566 Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT-GCATGCATCC 66133 | ||| || ||| |||||||||| |||| || || ||||| || || || || ||| Sbjct 93565 GGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTCCGGTTTGCGTG-ATCT 93507 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||||| ||| | || | || ||||| || | ||||| |||||| | ||| || Sbjct 93506 TTGTACAGCATAAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACCACAGC 93447 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | ||||||| || | ||| ||| | || | | ||||| | ||||||||| Sbjct 93446 TTCTGGGCCTTCAGTGT-CTTACGGCCGCGGCCCTCCTGCTCGTACTTCTCGTAGAGGGC 93388 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 || || ||||| | |||| || | || |||| || || ||||| || | Sbjct 93387 CTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCCGGGCACTCGTTGGGGCACATAAGGGT 93328 Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| ||||| | || || || || ||| || |||||||| |||||||| || ||| Sbjct 93327 CCAGTCACCGTTCTTCTCGACCCGCTTCATGAACAGATCAGGGATCCAGAGAGCAAGGAA 93268 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 || || || ||||| |||||| | ||||| || || |||| |||||||||||| || Sbjct 93267 AAGGTCACGAGCTCGGATCTCCTCCTTACCGTGGTTCTTCCGCAGGTCGAGGAACTCGAA 93208 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 || || || ||||| || || ||||| || ||||| | || ||| ||| |||||| Sbjct 93207 GACATCAGCGTGCCACGGCTCGAGGTAAATAGCGAAGGCACCGGGACGCTTGTTGCCACC 93148 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 |||||||| || || || ||||||||||| |||| ||| || || ||||| || Sbjct 93147 CTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCGCAGCATGGGAGTGATGCCGTTGGA 93088 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 | || |||||||| ||||| || || || || ||| ||| || ||||| || Sbjct 93087 GGTACCGTTGGTGCCAGCGATGTACGAGCCGGTGGCACGGATACGGTGGACGTTCAGGCC 93028 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTC 66672 || || |||||| |||| ||||| ||||| | ||| | ||||| || Sbjct 93027 GATGCCTCCGGCCATCTTGGAGATCATGGCACATGTCTTGAGTGTGTCATAGATGCCCTC 92968 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 ||| ||| |||| ||| | |||| |||| || || ||||| | ||| ||| | Sbjct 92967 GATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGATGACAGCTGGGGCTGGGGAGTGCC 92908 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792 || ||| || ||||| | || || || ||| | | | |||||| ||||| || Sbjct 92907 AGCATTGAATAGTGTGGGCGAGGCATGGGTGAAGAACTTGTTTGACATGAGGTTGTAGGT 92848 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTA 66852 ||||||||| || | | ||||| || || | |||| ||||| | | || Sbjct 92847 CTCGATGACCCTCTCCACATCATCGCCCCAGATGCCAACTGCAACACGCATGATCATGTG 92788 Query 66853 TTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGG 66908 || ||||| ||||| | |||| | || | || | ||||||||| || |||| Sbjct 92787 CTGTGGCCGCTCGACAACTTTGCCG----TCGAGCTTCAGGAGGTAGGAGCGCTCGAGGG 92732 Query 66909 TCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 |||||| || ||||| ||| ||| ||| | ||| || |||||| Sbjct 92731 TCTTGAACCCGAAGTATTGGTAGCCGAAGTCGCGATCATAGACAATGGCC 92682 >seq561 Length=46336 Score = 118 bits (130), Expect = 8e-22 Identities = 208/297 (70%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| || ||||| |||||||| | || ||| ||||| | Sbjct 7624 ATCTGGCAAATGTACAAGAAGCATGAGGCTTCTTTCTGGACCGCTGAAGAGATCGATCTC 7683 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | || | | ||| | ||| | | ||| | Sbjct 7684 TCCAAGGATCTCCACGACTGGAGCAACCGCCTGACCGAT-GATGAGCGTTACTTCGTCTC 7742 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| |||||||| || || |||||||| ||||| | |||| || Sbjct 7743 CCACATCCTCGCCTTCTTCGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTGGAGCG 7802 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| ||| | | ||||| ||||| ||||||||||||||||| | Sbjct 7803 CTTCA-GCGGCGAGGTCCAAATCCCTGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGA 7861 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| ||| | | ||||| || || ||||||| ||||| Sbjct 7862 TGGAGAACATCCACTCCGAGACGTATTCTTTGCTCATTGACACCTACATCAAGGAGC 7918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558934331440