Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4593 338 1e-90 seq10966 140 6e-31 >seq4593 Length=1355 Score = 338 bits (374), Expect = 1e-90 Identities = 211/224 (94%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 96 GTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGT-GCGG 154 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1355 GTTCAAAGCAGGCATATGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTCGCGG 1296 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 1295 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGACAGTCGGGGGCATCA 1236 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1235 GTATTCAATCGTCAGAGGTGAAATTCTTGGATCGATTGAAGACTAACTACTGCGAAAGCA 1176 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||||||||||||||||||| |||||||||||||||| Sbjct 1175 TTTGCCAAGGATGTTTTCATTAATCAG-GAACGAAAGTTAGGGG 1133 >seq10966 Length=1229 Score = 140 bits (154), Expect = 6e-31 Identities = 85/90 (94%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct 90 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 31 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAG 94 |||||||||||||| |||||||||||||| Sbjct 30 ACCAGGACTTTTACTGTGAAAAAATTAGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915077527936