Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10]
13,382 sequences; 46,487,794 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq6109 354 3e-95
seq12943 315 3e-83
>seq6109
Length=707
Score = 354 bits (392), Expect = 3e-95
Identities = 279/334 (84%), Gaps = 4/334 (1%)
Strand=Plus/Plus
Query 350 CCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCC 409
||||| |||| ||||||||||||||||| ||||||||||||||||||| || | ||
Sbjct 13 CCCGCGGGGACCGAGGTCCGCGCTCCGGCAAGGATGCTGGCGTAATGGTCACCAGTGACC 72
Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCG 469
||||||| |||||||||||||||||| ||| ||||| |||||||||| |||||||
Sbjct 73 CGTCTTGAAACACGGACCAAGGAGTCGTCCATTAGAGCGAGCGTTTGGGTGTAAAACCCG 132
Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529
||||||||||||||||||| ||||| || | || ||| ||||||||||||||
Sbjct 133 CACGCGTAATGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCT 188
Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589
||||| ||||| ||||||||||||||| | | |||||||||||| |||||||
Sbjct 189 GATGTTCTCGGAAGGATTTGAGTAAGAGTTTTAACGGACGGACCCGAAAGACAGTGAACT 248
Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649
|||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 249 ATGCTTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGT 308
Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||| || | || |||||||
Sbjct 309 GCAAATCGATCGTCAAATATGAGCATGGGGGCGA 342
>seq12943
Length=1557
Score = 315 bits (348), Expect = 3e-83
Identities = 266/323 (82%), Gaps = 3/323 (1%)
Strand=Plus/Plus
Query 15 CCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73
|| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 1226 CCAAGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGG 1285
Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1286 GAGGTAAATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 1345
Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||||||||||||||||||| ||| |||| | |||||| || |||||||||||||||||||
Sbjct 1346 ATCGAAAGATGAAAAGCACCTTGAAAAGGGGGTTAAATAGTACGTGAAATTGTTGAAAGG 1405
Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACT 252
||||| |||| |||||||||| | | ||||| | || ||| || ||||| |
Sbjct 1406 GAAGCACTTGTGACCAGACTTGGGCCGGGCGGCTCATCAGGGGTTCTC-CCCTGTGCATT 1464
Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312
| | | |||||||||||| | | |||| |||||| | |||||| || ||
Sbjct 1465 CCGCCCGGCACAGGCCAGCATCGGTTTTCGCGGGGGGATAAGACCGGCGGGAACGTAGCA 1524
Query 313 CCCTTCGGGGGGTGTTATAGCCC 335
|||| ||||| ||||||||||||
Sbjct 1525 CCCTCCGGGGTGTGTTATAGCCC 1547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079712956100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |