Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6109 354 3e-95 seq12943 315 3e-83 >seq6109 Length=707 Score = 354 bits (392), Expect = 3e-95 Identities = 279/334 (84%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 350 CCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCC 409 ||||| |||| ||||||||||||||||| ||||||||||||||||||| || | || Sbjct 13 CCCGCGGGGACCGAGGTCCGCGCTCCGGCAAGGATGCTGGCGTAATGGTCACCAGTGACC 72 Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCG 469 ||||||| |||||||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct 73 CGTCTTGAAACACGGACCAAGGAGTCGTCCATTAGAGCGAGCGTTTGGGTGTAAAACCCG 132 Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529 ||||||||||||||||||| ||||| || | || ||| |||||||||||||| Sbjct 133 CACGCGTAATGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCT 188 Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 ||||| ||||| ||||||||||||||| | | |||||||||||| ||||||| Sbjct 189 GATGTTCTCGGAAGGATTTGAGTAAGAGTTTTAACGGACGGACCCGAAAGACAGTGAACT 248 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 |||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 249 ATGCTTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGT 308 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||| || | || ||||||| Sbjct 309 GCAAATCGATCGTCAAATATGAGCATGGGGGCGA 342 >seq12943 Length=1557 Score = 315 bits (348), Expect = 3e-83 Identities = 266/323 (82%), Gaps = 3/323 (1%) Strand=Plus/Plus Query 15 CCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73 || |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 1226 CCAAGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGG 1285 Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1286 GAGGTAAATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 1345 Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||||||||||| ||| |||| | |||||| || ||||||||||||||||||| Sbjct 1346 ATCGAAAGATGAAAAGCACCTTGAAAAGGGGGTTAAATAGTACGTGAAATTGTTGAAAGG 1405 Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACT 252 ||||| |||| |||||||||| | | ||||| | || ||| || ||||| | Sbjct 1406 GAAGCACTTGTGACCAGACTTGGGCCGGGCGGCTCATCAGGGGTTCTC-CCCTGTGCATT 1464 Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312 | | | |||||||||||| | | |||| |||||| | |||||| || || Sbjct 1465 CCGCCCGGCACAGGCCAGCATCGGTTTTCGCGGGGGGATAAGACCGGCGGGAACGTAGCA 1524 Query 313 CCCTTCGGGGGGTGTTATAGCCC 335 |||| ||||| |||||||||||| Sbjct 1525 CCCTCCGGGGTGTGTTATAGCCC 1547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079712956100