Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10]
13,382 sequences; 46,487,794 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq10978 239 7e-61
>seq10978
Length=1734
Score = 239 bits (264), Expect = 7e-61
Identities = 225/279 (81%), Gaps = 7/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 824 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 881
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 882 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 941
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| || | |||||| |||||| |||||||| |||||| || |
Sbjct 942 GAACGCGACGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCCTCGGCCTCGTAT 1000
Query 181 CTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| ||||||| | | |||| || |||| | | || | || | ||| ||||
Sbjct 1001 CTCAGCAGGCGATCCCTCCGGCGGCCTC--GAAGTGGTCGTCGGT-AGTTCGCGTATTGT 1057
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || | || ||| ||||||||||||||||||
Sbjct 1058 AATTTAGACACGTGCGGGGTCAAATCCTTTGCAGACGAC 1096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819093800448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |