Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7991 253 2e-62 seq12282 149 5e-31 >seq7991 Length=9451 Score = 253 bits (280), Expect = 2e-62 Identities = 548/809 (68%), Gaps = 18/809 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || |||| || || | |||||| || || | |||||| || || ||||||| Sbjct 2075 GGTAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCGTCCGGTGCACAGTACTCGATG 2134 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || || || ||||| |||| |||| || || |||||||| Sbjct 2135 ATCTCTGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGG 2194 Query 66122 TT-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || || || ||||| |||| |||| | || |||| ||||| || | || | || Sbjct 2195 TTTGCGTGG-TCCTTATACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAAT 2253 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGTACC---GCCCTACCTTTGCGTTC 66234 || | ||| || | ||||||| || || ||| ||||| |||| || Sbjct 2254 AGCATACCACAGCTTCTGGGCCTTCATGGTCTTGCG-ACCTCGGCCCT-CCTTC----TC 2307 Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 ||| || |||||||| ||||| || || | |||| || | ||||||| Sbjct 2308 GTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGACACTC 2367 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 || ||||||||||| | ||| ||||| | || || || || ||| || ||||| || Sbjct 2368 GTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGG 2427 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414 ||||||||||| ||| ||||| || ||||| |||||| ||||||| || ||||| Sbjct 2428 GATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCTTGCG 2487 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 || ||| ||||||||||||| || || |||||||| || |||||||| || || | || Sbjct 2488 CAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAAGCACC 2547 Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534 ||| || ||| || || |||||||| || ||| ||||||||||| |||| ||| Sbjct 2548 AGGACGCTTATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCAT 2607 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 ||| || || |||||| |||| || ||||| ||||| || || || || || Sbjct 2608 TGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGAT 2667 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCC 66652 ||| || |||||||| |||||||| ||| |||| ||||| ||||||| || | Sbjct 2668 GCGGTGCACGTTCAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAG 2727 Query 66653 ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTA 66712 |||| | | ||||| || ||| ||| |||| ||| | ||| ||||||| Sbjct 2728 GGTGTC--GTAAATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGAC 2785 Query 66713 AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGG 66772 | ||||| | || ||| | || ||| | ||||| | || || || ||| | | Sbjct 2786 AACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAAGAACTTA 2845 Query 66773 CGAGACATGTAATTGTACGTCTCGATGAC 66801 ||||| ||||| ||||||||||| Sbjct 2846 TTTGACATCAGGTTGTAGGTCTCGATGAC 2874 >seq12282 Length=8984 Score = 149 bits (164), Expect = 5e-31 Identities = 299/443 (67%), Gaps = 3/443 (1%) Strand=Plus/Plus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 ||| || | || || || | || ||||| | || ||||| || | || ||| | || Sbjct 7623 CGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCATT 7682 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| | ||||| || || || ||||| || ||||||||| ||| ||| | || || Sbjct 7683 TTCTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTAATTTCT 7742 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 || || ||||| |||| || || ||| | | || ||| | | ||| |||| Sbjct 7743 CGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTCCTGTTCTCTCAC---CTGAGGAAT 7799 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 |||||| | ||||||| | || || | ||||| || | ||||| |||| Sbjct 7800 CGTCCGAGCAAACAGCGTGTTGAGGATATCATCACCGAGGCTGTTGCCATCGAGAAGGAG 7859 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || |||| || ||| |||| | | ||| |||||||||| | || ||| ||| Sbjct 7860 TTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAACAG 7919 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || ||||||||||||||||| |||||| | |||| | || | | || || Sbjct 7920 TACATCGAGTTTGTTGCCGACCGTCTACTGGTCGCTCTGGGCAATGAGAAGGTTTACAAG 7979 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 | |||||| || || |||||||| | || || || | ||||||||| || || || Sbjct 7980 TCATCAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTT 8039 Query 61909 GAGAAACGTGTAGGCGACTATCA 61931 ||||| ||||| || ||||| || Sbjct 8040 GAGAAGCGTGTTGGTGACTACCA 8062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397503159392480