Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_034209.1 Length=3170 Score E Sequences producing significant alignments: (Bits) Value seq6845 464 1e-127 >seq6845 Length=3264 Score = 464 bits (514), Expect = 1e-127 Identities = 1035/1542 (67%), Gaps = 36/1542 (2%) Strand=Plus/Plus Query 1220 TAGAAATAAATACTGACCGAAGAATAGCTCGACCGAAATCACTGTGCCTGTACGGCGAAA 1279 ||||| |||| || |||||| |||||| ||||| || | ||| | ||||||||||| | Sbjct 1203 TAGAACTAAAGGCTAACCGAAAAATAGCACGACCTAAGTTACTCTATCTGTACGGCGATA 1262 Query 1280 CAAGACTGTACAAAACAATTTGGGCACGAAGTCTGGGACCCCACTCTTACATGAGTGGAT 1339 |||| ||||||| | ||| ||||| |||||||| | || |||| |||||| || || | Sbjct 1263 CAAGGATGTACAAGATAATCTGGGCGCGAAGTCTCGCGCCACACTATTACATTAGCGGCT 1322 Query 1340 GTTGGAATGCGAGACTGCTCGACGACGACAAGCAGTATGTCGTGATTGATGACGTGCCCT 1399 ||||||| ||||| || | | |||| | || | || ||| || | || || Sbjct 1323 GTTGGAACGCGAGTTTGTTAAATAGTAACAAAGAATACCTTGTTATTAATAATGTCCCTC 1382 Query 1400 TGGATGACAAGGACATGTTCAAGCATTTCAAGCAAATGCTCGGGTGCCAGAATAATTTTT 1459 | |||| || || || || || | |||||||| || ||||| |||||||||||| Sbjct 1383 TCACAAACAAAGATATATTTAAACACTATAAGCAAATACTTAGGTGCTAGAATAATTTTT 1442 Query 1460 CTGTGACGGACAAGTACGTCAAGAAGTTGCACTTCGCGAAGTGGGGGCTGCCATGCATTT 1519 || | | | | |||||| | || ||| | |||| | | ||||||||| | || |||| Sbjct 1443 CTATAATGAATAAGTACCTAAAAAAGGTATACTTTCCAAGGTGGGGGCTACTATATATTT 1502 Query 1520 ACTTGGCCAACCAAGACCCCAGGGAGTACAGCACCATAGACGGGACCCACCGTAGAT--G 1577 | || || || | || || ||| || || |||| | || | | Sbjct 1503 ATTTAGCAAATTAGGATCCTCGGG-GT---------TATTTGGGAGTAAATATACACTAG 1552 Query 1578 GTTGAACGGAAATTGTGTTTTTGTCGAAGTAGAAAAACCCCTGTTCGTAGCTTCATCGGG 1637 | | | |||| || | ||||||| ||||| || ||||| || || |||||| | ||||| Sbjct 1553 CTAGCAAGGAA-TTATATTTTTGTAGAAGTGGATAAACCACTTTTTGTAGCTACCTCGGG 1611 Query 1638 TCCGGGTACACCGGACTCAAGACAGGAACACCTGTCTCAATTTTTACAAGAAGCAGAGCA 1697 | | || | ||| | ||| | | | | ||||| || || | | || || Sbjct 1612 ATTGAGAACTTCCAACTTTAAACAAAAGGCTTTATTTTAATTTCTAGAAAAGGTAG--CA 1669 Query 1698 AGACGAAAGCTTTTAAACAATAAAAATTTCATTCTCGCCAATACAACGCTGAACTAATGT 1757 | | | || |||||| ||| |||| ||| ||||||| | || ||| | Sbjct 1670 A-ATAATAGTTTTTAATTTT-----ATTCTATTCGCGCTAATACAATACAAAAGAAATAT 1723 Query 1758 TCCTCATCTCAATAGCAGGAACAGCAACACCTTTCCTATCCAGAATAATCGTAGAGGCCT 1817 |||| |||| |||||||| |||| |||| | ||| |||||| |||| | ||| |||||| Sbjct 1724 TCCTTATCTTAATAGCAGAAACAACAACGCTTTTTTTATCCAAAATAGTTGTAAAGGCCT 1783 Query 1818 CAGACTCAGCAGTCGAAGGCCGAGACCCATACCCCGGAATTCCCCGCTCCCGCTTCGGGA 1877 ||| | || ||||||||| |||| || | |||| |||||||||||||| Sbjct 1784 TAGAATTAGTAGTCGAAGGTTAAGACTTGTAT------AAGCCCCTCTCCCGCTTCGGGA 1837 Query 1878 CC-CTA----GGAT-CATCCACATCCATGCGACCAACATCTGGCATACCAATACTCTGCC 1931 | ||| ||| | | | | ||| || ||||||| || |||| ||| || | Sbjct 1838 TCGCTAACGCGGACACGTTAAGCTTCATCCGGCCAACATTAGGTATACTCTTACCCTTTC 1897 Query 1932 GCACAACCTGCTCCGTAGAAAACGAAGGAACATGAACCAACACAATAAAGTACACGTTGT 1991 ||| | | |||| ||||||||||||| || || |||||| |||| ||| |||| |||| Sbjct 1898 GCAAAGCTTGCTTTGTAGAAAACGAAGAAATATAAACCAATACAACAAAATACATATTGT 1957 Query 1992 ACGGCTTCTCATCAATGCCACGCGTACAAACACCGTCCCGGTCGACTATATCAGAAGTCT 2051 ||| |||||| | ||||| ||||||| | | || || | | ||| ||| | || | Sbjct 1958 ACGACTTCTCGTTAATGCTACGCGTATACAAACTATCTCTAGCAACTTAATCGAACGTTT 2017 Query 2052 GCTGATACGTCACCTTGCCATGCAAATCCAACCACGCAGAAACAGGCCGAAACTGAAACC 2111 ||| ||| | ||||| | |||||||| ||||||||| |||| ||||||| | || Sbjct 2018 GCTAATATATTACCTTCCTATGCAAATTTAACCACGCATTAACAAAGCGAAACTAATACT 2077 Query 2112 GATCGCCAACCGTAAAATGCTGTACTTGGTCCAGCAAAATACGACCCTTCGTGCGCTTCG 2171 || | ||| |||||||||| |||||||| | ||| | |||||| |||||||| | Sbjct 2078 AATTACTAACAGTAAAATGCTATACTTGGTTTAACAACACCTAACCCTTGGTGCGCTTTG 2137 Query 2172 ACACAGACCGGAAAAACCAAGGCCGCAAATCCTCACTGGAAAAAA-CACCATTGTTCACG 2230 | ||| || ||||| | || |||| | | | ||||||| | | | || Sbjct 2138 CAATAGAACGAAAAAAATACGGGTGCAAGTTATTTTTCGAAAAAATGTTGCTAGATAAC- 2196 Query 2231 TCCAAAAAATGGACAATACCATGTCCGGTGCCGGAAAGAGGACCGAACCCACCATTCTGG 2290 || ||||||| | | ||| | | | || | || || | || | | | Sbjct 2197 TCTAAAAAATTCCCTACCCCAAGGCTAAAACTAGATATTAGATTAAAACTACTAGTTTAA 2256 Query 2291 GTGTTTTTCAACCCAACAGAATCACCGGTGACATTAAACCAGTTCCTATCTGTGTCAAGG 2350 | || || | || ||| || | | ||||||||| ||| ||||| | | || Sbjct 2257 AAATGCTTTAAATTAGCAAAATTCCCAGCAATATTAAACCAATTCTTATCTATATTAATA 2316 Query 2351 ACCACAGATAACACACGCACACTGCACGTCCGAGAAACACATATCTCAAACGACAGCTTC 2410 | ||| | || || ||| | |||| ||||||| | | ||||||||||| ||||| Sbjct 2317 ATAACAAACAAAACTTGCATATTGCATAAGCGAGAAATATAAATCTCAAACGATAGCTTT 2376 Query 2411 GCACCCCGCAAGTGGACCTCTCGCCCACTGGACCGATCACCAGACCGACAGACCTCTGTA 2470 ||||| || | || |||||| || ||||||| | | ||| | ||| | ||| ||| Sbjct 2377 GCACCTCGAAGGTATACCTCTTACCTACTGGACTAGTTTCTAGAACAACAAATCTCCGTA 2436 Query 2471 GCCGGAAGCACGAAACCAGAATCTGGATCGCCGGCATGCATCTCACAATGCGCAGAGGCT 2530 || | ||||| |||| | |||||||||||| ||||| |||||||||||||| |||| Sbjct 2437 GCTGAAAGCATAAAACTAAAATCTGGATCGCTAGCATGTATCTCACAATGCGCGAAGGCC 2496 Query 2531 GAGCCAGGACCGGCCAAGCTGACAGTCTTA-ttttttttttCTTGGCCAACAGAATTCAC 2589 | | |||| || || | | | |||| ||||||||||||||||| | | ||| | Sbjct 2497 GGACTAGGATTAGCTAAATTAATAAACTTATTTTTTTTTTTCTTGGCCGATACTATTGAT 2556 Query 2590 TGCTGACGCAAAACGATAATAAGGGCGGCTGTTGTAAAAATGGCGGCGATACCCGCCGCG 2649 || ||||| || | |||||| || | || |||||||||||| |||||| || | | Sbjct 2557 GGCGGACGCGAACCAATAATACGGCCAACTATTGTAAAAATGGTAGCGATAGCCACTACA 2616 Query 2650 ACGACCGAAGACCATGGTCTAATACCGTCGATAAGATCGACGTCGGGTAATGCCAGTGAA 2709 | || ||| || || |||| || ||| || ||||| | || |||| | ||| || Sbjct 2617 ATAACTGAAAACTATAATCTAGTAACGTTAGTACAATCGATGGCGAGTAACACTAGTAAA 2676 Query 2710 GCGGACTGGACCGTAGCTTGATTGATTGCGTCGAAAGGAAGA 2751 ||| ||||| |||||| | | ||||||| |||||||||| Sbjct 2677 TTGGATTGGACTATAGCTTAACTAATTGCGTTGAAAGGAAGA 2718 Score = 428 bits (474), Expect = 9e-117 Identities = 722/1045 (69%), Gaps = 25/1045 (2%) Strand=Plus/Plus Query 50 GCCGTGGTGTCCTAC-CCGCTGCACGCAAAATCATTCGTCTATATAAGGGACGCCAGGAC 108 ||||||||||||||| |||||||| |||||| | ||||||||||| || | ||||| Sbjct 49 GCCGTGGTGTCCTACTCCGCTGCATGCAAAAAGTCTGGTCTATATAAGA-ACACTAGGAC 107 Query 109 ACCT--CCTAAAATCTGACTGCAGTGTCCTACACACCATCG---CACAGAGCGGTGAAAG 163 ||| |||||| ||| ||||||||||||||||| | | | | ||| ||| || | Sbjct 108 ACCCAACCTAAA-TCTCACTGCAGTGTCCTACACGCTACTGTTTCTCAG---GGTTAA-G 162 Query 164 CCACCGCCC-ACCATGGATCTCACTCAGCTGTTCCTGACCTCTNNNNNNNNNNNNNNNNN 222 |||| | | || ||||||||| | ||||||||||| || ||| Sbjct 163 CCACAACGCTACAATGGATCTCTCCCAGCTGTTCCTAACATCTTCCCCTATTCCTCCTTC 222 Query 223 NNN---ACCAAATCCATTGACACTGAACATTCGG------GACCTATCGCAAGACGNNNN 273 |||| | | |||| ||||| ||| ||| | ||||||| Sbjct 223 TTATTAACCAGACTCGTTGATGCTGAATTTTCTACAAGACGACTTCCTACAAGACGACTT 282 Query 274 NNNNNNNNNNNNNNNATCAAGCTTCGTTGTCCCAGACTCTCAATTTCCTGGACCAGAGGC 333 || | ||| ||||||| || | ||||| | || | | | Sbjct 283 CCCATAAAACAATCTATTTAACTTTATTGTCCCGGATTTACAATTCCTGGGTCTACAACT 342 Query 334 TCTGCCACTGTCATCTCCACAATTCATGACTCCGCTGCTGCACACAGAGTCTCTCTTCGT 393 || | | ||| || | | ||| || ||||| ||| || | | || |||||||| Sbjct 343 ACTACTATTGTTATTTTACCCATTTATAACTCCTGCACTGGACTAACAATCCCTCTTCGT 402 Query 394 CTCCCAACCGGACGAAGACGACCAACCAGAGGACCAACAAGACGCTGTTGGTTCTGACGA 453 |||| ||| ||||||||| ||| | |||||||||||||||||||||||| || | Sbjct 403 TAGCCAATTGGATGAAGACGACTAACTAAAGGACCAACAAGACGCTGTTGGTTTCGATAA 462 Query 454 CGAGCTCGGCCTCGTCGACCCACTCGACGAGACGGCGGGGAAATTCCGACTGGCTGCTAA 513 | |||| ||||| || ||| |||||| | ||||| || ||||| || |||||||||| Sbjct 463 CAAGCTTGGCCTTGTTAACCTACTCGATAACACGGCAGGCAAATTTCGCTTGGCTGCTAA 522 Query 514 ATCAGTCTTTCTGACCTACCCCAAGTGTCAC-CTCGACAAGGAGGTGTTCGTCAAGGCGA 572 ||| || ||| | | ||||| ||||| ||| || || ||||| || || || || Sbjct 523 ATCCGTTTTTATTATATACCCGAAGTG-CACACTAGATAAGGACGTTTTTGTTGCTGCAC 581 Query 573 TCGAGAAATTCAAGTTCGATCAGTTCTACGCTGTGCGCGAAGATCACAAGGACGGCACCC 632 | || ||||||||||| || |||| |||||||||||||||||| ||||||||||||||| Sbjct 582 TTGAAAAATTCAAGTTTGACTAGTTTTACGCTGTGCGCGAAGATTACAAGGACGGCACCC 641 Query 633 CCCACTATCACGTGATAGGAGAGTGGTCAGTCAAGAAGAACATCAAGAACCCCCGCCACT 692 | |||||| |||| || || |||| || || || || || || ||||| ||| || Sbjct 642 CGCACTATTACGTAATTGGGGAGTAAACAACGAAAAA-AATATTAAAAACCCTCGCTTCT 700 Query 693 TCGACATCCAGAAGTACCACCCGAACATCGGGAGGACTCGGAACAGGCTAGCTGCCTGGA 752 | |||| || | || ||||| ||||| |||| ||| ||| | | || || |||| Sbjct 701 TTAACATTCAAAGGTTTCACCCAAACATTAGGAGAACTTAGAATTGCTTGGCGGCTTGGA 760 Query 753 GATACGTCCACAAAACCAAAGGACGCTCAACGCACGTCGGCGGCGACATGCCAGAACCTG 812 |||| |||||||||||||||| |||||| || |||||||| || || || | | | |||| Sbjct 761 GATATGTCCACAAAACCAAAGAACGCTCCACCCACGTCGGAGGAGATATACTAAAGCCTG 820 Query 813 TCGGCATCCGAAAGGAAGCCAAGGACGACTTCTGGAAAGAAGCTGTCACCATCAAGGACC 872 | |||||||| ||||| || |||| || |||||||||||||| ||||| ||||||| Sbjct 821 TTGGCATCCGGCGCGAAGCTAAAAACGATTTTTGGAAAGAAGCTGTTACCATTAAGGACC 880 Query 873 GGAACACGTTCATCTCGAGATTCCGCCAAGAGGCCCCAAGGGACCTCATTGTACACTACT 932 ||| | ||| || | ||||||| || |||||||| ||||||| || | ||||||| Sbjct 881 GGAGGAAGTTTATTACCCGATTCCGAGAAAAGGCCCCACGGGACCTTATCTTGCACTACT 940 Query 933 CCAACGTCAAAGCATACGCAGACGATGAGTTCAAAGTGGAAGCCCCAGAATACTGTACCC 992 ||| | || || || ||| | | ||||| || ||||||| | ||| ||| |||| Sbjct 941 TAAACATTAAGGCCTATGCAAATAACGAGTTTAAGGTGGAAGTACTAGAGTACACCACCC 1000 Query 993 CGGAAATGTCGGGGTACTGGGACCTGCCCGAGGAGCTGAAGGAGTGGGTCGAGGAAAACC 1052 | | |||| || |||||| |||| | | | | || ||| | ||||||||| Sbjct 1001 CCTAGATGTTAGGCGTTTGGGACTTGCCAAACGCTATTATAGAATGGATTAAGGAAAACC 1060 Query 1053 TCACACACAAATCAGGTTAGTGCAT 1077 | | | ||| || |||||||||| Sbjct 1061 TTAAAACAAAACCAAGTTAGTGCAT 1085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10030531660050