Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq486 641 0.0
>seq486
Length=11265
Score = 641 bits (710), Expect = 0.0
Identities = 549/671 (82%), Gaps = 9/671 (1%)
Strand=Plus/Minus
Query 15 CCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73
|| |||| ||||||| ||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct 4602 CCAAGCCTGTGTGAAACTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGG 4543
Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4542 GAGGTAAATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 4483
Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||||||||||||||||||| ||| |||| | |||||| || |||||||||||||||||||
Sbjct 4482 ATCGAAAGATGAAAAGCACCTTGAAAAGGGGGTTAAATAGTACGTGAAATTGTTGAAAGG 4423
Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACT 252
||||| ||| |||||||||| | | ||||| | || ||| || |||||||
Sbjct 4422 GAAGCACTTATGACCAGACTTGGGCCGGGCGGCTCATCAGGGGTTCTC-CCCTGTGCACT 4364
Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312
| | | |||||||||||| | | |||| |||||| | |||||| || ||
Sbjct 4363 CCGCCCGGCACAGGCCAGCATCGGTTTTCGCGGGGGGATAAGACCGACGGGAACGTAGCA 4304
Query 313 CCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC 372
|||| ||||| |||||||||||||| | || | ||||| |||| |||||||||||
Sbjct 4303 CCCTCCGGGGTGTGTTATAGCCCGGCGGACGATAC-CCCCGCGGGGACCGAGGTCCGCGC 4245
Query 373 TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432
||| || ||||||||||||||||||| | || | ||||||||| |||||||||||||||
Sbjct 4244 TCC-GCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGA 4186
Query 433 GTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGA 492
||| ||| ||||| |||||||||| ||||||| ||||||||||||||||||| |
Sbjct 4185 GTCGTCCATTAGAGCGAGCGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGCA 4126
Query 493 GGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
|||| || | || ||| ||||||||||||||||||| ||||| ||||||||||
Sbjct 4125 GGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGAAGGATTTGAGT 4070
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
||||| | | |||||||||||| ||||||||||| || |||||||||||||||
Sbjct 4069 AAGAGTTTTAACGGACGGACCCGAAAGACAGTGAACTATGCTTGTATAGGGTGAAGCCAG 4010
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
Sbjct 4009 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAG 3950
Query 673 TATAGGGGCGA 683
|| |||||||
Sbjct 3949 CATGGGGGCGA 3939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079978871750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |