Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq540 116 9e-24
>seq540
Length=7676
Score = 116 bits (128), Expect = 9e-24
Identities = 199/284 (70%), Gaps = 16/284 (6%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||| ||||| | ||||||||
Sbjct 4597 TAAACTGTATCTGCACAGTTATTCCAATTTCACAGAGTCAATCATAGAGACAGCTGTTGT 4538
Query 67 ATCGTTACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125
|||||||| |||||| |||| | | | | ||| | | ||||| ||| ||||||||||||
Sbjct 4537 ATCGTTACACCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGG 4478
Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC--TTC------GCG 177
||| | | | || ||||||| || ||||||| ||| || | | | ||
Sbjct 4477 ACCCTCACTTATAAGGCCGCCATTAACCGGGGTTTCCTTCTACACCAAATCTATGAAAAT 4418
Query 178 TTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA 237
|||| || || |||||| ||||||||||||||| |||||| | |||| | |
Sbjct 4417 TTAGTTA----TTTCCGTTAACCAGCCGGCACCGGGCAGGTATCACACTCAATACTTAGA 4362
Query 238 CTT-TC--GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| || | |||||| ||||||||||||| | ||||||||||
Sbjct 4361 TTTATCATCTTTTTGCAAAGTGCTGTGTTTTAATTAAACAGTCG 4318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260787581120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |