Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq540 116 9e-24 >seq540 Length=7676 Score = 116 bits (128), Expect = 9e-24 Identities = 199/284 (70%), Gaps = 16/284 (6%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||| ||||| | |||||||| Sbjct 4597 TAAACTGTATCTGCACAGTTATTCCAATTTCACAGAGTCAATCATAGAGACAGCTGTTGT 4538 Query 67 ATCGTTACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||||||| |||||| |||| | | | | ||| | | ||||| ||| |||||||||||| Sbjct 4537 ATCGTTACACCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGG 4478 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC--TTC------GCG 177 ||| | | | || ||||||| || ||||||| ||| || | | | || Sbjct 4477 ACCCTCACTTATAAGGCCGCCATTAACCGGGGTTTCCTTCTACACCAAATCTATGAAAAT 4418 Query 178 TTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA 237 |||| || || |||||| ||||||||||||||| |||||| | |||| | | Sbjct 4417 TTAGTTA----TTTCCGTTAACCAGCCGGCACCGGGCAGGTATCACACTCAATACTTAGA 4362 Query 238 CTT-TC--GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || || | |||||| ||||||||||||| | |||||||||| Sbjct 4361 TTTATCATCTTTTTGCAAAGTGCTGTGTTTTAATTAAACAGTCG 4318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260787581120