Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq486 244 2e-62
>seq486
Length=11265
Score = 244 bits (270), Expect = 2e-62
Identities = 226/279 (81%), Gaps = 7/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 1852 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 1795
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1794 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1735
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| || | |||||| |||||| |||||||| |||||| || |
Sbjct 1734 GAACGCGACGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCCTCGGCCTCGTAT 1676
Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | |||| || |||| | | || | | | ||| ||||
Sbjct 1675 CTTAGCAGGCGATTCCTCCGGCGGCC--TCGAAGTGGTCGTCGGT-AATTCGCGTATTGT 1619
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | || | || ||| ||||||||||||||||||
Sbjct 1618 AATTTGAACACGTGCGGGGTCAAATCCTTTGCAGACGAC 1580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192183040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |