Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq486 244 2e-62 >seq486 Length=11265 Score = 244 bits (270), Expect = 2e-62 Identities = 226/279 (81%), Gaps = 7/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 1852 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 1795 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1794 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1735 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| || | |||||| |||||| |||||||| |||||| || | Sbjct 1734 GAACGCGACGATAC-CTCCCGCGCGTCGTAGACGGATAAGAATAGGCCTCGGCCTCGTAT 1676 Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | |||| || |||| | | || | | | ||| |||| Sbjct 1675 CTTAGCAGGCGATTCCTCCGGCGGCC--TCGAAGTGGTCGTCGGT-AATTCGCGTATTGT 1619 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | || | || ||| |||||||||||||||||| Sbjct 1618 AATTTGAACACGTGCGGGGTCAAATCCTTTGCAGACGAC 1580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192183040