Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq334 327 9e-85 seq279 152 4e-32 >seq334 Length=742376 Score = 327 bits (362), Expect = 9e-85 Identities = 1137/1747 (65%), Gaps = 64/1747 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | ||||| |||| ||| | || ||||||||||| ||| Sbjct 394286 TCGACAGTGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTC 394345 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTC-GGCT 65195 ||||| || ||| ||| | ||| ||||| | || | || |||| | | |||| Sbjct 394346 TTGAGACCGAGCTT-CCAGCCGGCGAAGTGCAT-GCTGGTGATCTTGCCCATTGATGGCT 394403 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | |||||| ||||| ||| | |||||| || ||||||| Sbjct 394404 CCCTCATGTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCA 394463 Query 65256 TGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACC 65311 | | ||||| | | | || |||||||||||||||||||| ||| | | | | Sbjct 394464 TCTGCACAATGGTCCTCTGA---GAGATCTCCCAGACGGTCTTGTAGAGG-GCCTTGATA 394519 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCA-CGACGTGCAATAATGCGATTACG 65370 ||| || || ||||| ||| | |||||| | || || || || || || Sbjct 394520 TCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCG-GCGATGATACGGTTCTT 394578 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGAT----GTTGAACCAAGTGACGATTGA 65426 ||| | ||| |||||||| || | || | |||| | || ||||| | |||| Sbjct 394579 CATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGG----TTGA 394634 Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486 ||| ||||||||||| | || ||||| || ||||||||||| ||| || |||| Sbjct 394635 CGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAA 394694 Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 || | ||| ||||||| || ||||| | || || ||||| ||||| || || | ||||| Sbjct 394695 AGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACA 394754 Query 65547 ATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--T 65604 | ||| || | || || | || || | || | | ||||||| ||| | | Sbjct 394755 AGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGT 394814 Query 65605 CGGTTTATCG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTG 65659 ||| | | | ||||| | ||||| || |||||| | || || || | Sbjct 394815 CGG---AGGGCTTGACATTC------CACATGTCGAACTGCAGGATGCCTTGCGAGACGG 394865 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGT 65718 | | | || | | | | ||| |||||| ||||||||| | || | || Sbjct 394866 GGCTG----CCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCA 394921 Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATC 65778 | ||| || || || ||||||||||| || | || || ||||| ||||| Sbjct 394922 GT-GAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGG 394980 Query 65779 GCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACC 65838 | ||| | || || | || | || | |||||| ||||| ||||| || | ||| Sbjct 394981 GGAGTCGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGACACC 395040 Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898 || || || || |||| ||| ||||| || ||||||| |||| ||| Sbjct 395041 AATAGGTCGGTGCCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATC 395100 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAA 65956 || || ||||| ||||| || || || | || ||| ||| || | ||| Sbjct 395101 AATGATCTTGTTCAAGTTGCGGACGACGACCTGG--GTAACCTCGTGCAACTGCTGGAAG 395158 Query 65957 TCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGAT 66016 | | ||| | | | || || | | ||| | ||| || |||| || Sbjct 395159 T-------TGTAGCAG--TTGT---TGTCGTAGTCAACATATGCGGGCAGAGCAATGGAG 395206 Query 66017 GCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGA 66076 || | |||||| || || | ||| || || || | ||||| | || || ||||| ||| Sbjct 395207 GCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGA 395266 Query 66077 TTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG-CATGCATCCTT 66135 || || || ||||| |||| |||| || || ||||| || ||| | || ||||| Sbjct 395267 TTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGG-TCCTT 395325 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 ||||| |||| | || |||| |||||| |||| ||| | ||||| | ||| || Sbjct 395326 GTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCATAGCTT 395385 Query 66196 GCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTT 66254 | ||||||| || | | | || | ||| | ||||| || |||||||| | Sbjct 395386 CTGGGCCTTCATGGT-CTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCT 395444 Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314 | || ||||| | |||| || | ||||||| || || |||||||| | || Sbjct 395445 CAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCC 395504 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 | ||||| | || || || || ||| || ||||| || ||||||||||| ||| | Sbjct 395505 AGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAA 395564 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 |||| || ||||| |||||| | |||||||| ||||||| ||| || ||||| |||| Sbjct 395565 GATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCGCAGGTCAAGAAACTCGAAGA 395624 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 ||||| |||||||| || |||||||| ||||| | || ||| ||| |||||| | Sbjct 395625 CATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCT 395684 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 |||||||||| || ||| ||||||||||| |||| ||| || || || ||||| Sbjct 395685 GGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGG 395744 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | || |||||||| ||||| || || || || || ||| || |||||||||| Sbjct 395745 TACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAA 395804 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAA 66674 | ||||| ||| |||| ||||| ||||||| | || | ||||| |||| Sbjct 395805 TTCCACCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAA 395864 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 || ||| |||| ||| | |||| ||||||| || ||||| | ||| ||| | | Sbjct 395865 TGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAG 395924 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | ||| | ||||| | || || || ||| | | | ||||| ||||| |||| Sbjct 395925 CATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTATGTCT 395984 Query 66795 CGATGAC 66801 | ||||| Sbjct 395985 CAATGAC 395991 >seq279 Length=349471 Score = 152 bits (168), Expect = 4e-32 Identities = 218/301 (72%), Gaps = 7/301 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||||||||||||||| | |||||| ||||| | Sbjct 263522 ATCTGGCAGATGTACAAGAAGCATGAAGCTTCCTTCTGGACTGCCGAGGAGATCGATCTC 263463 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| || | |||||| | || | | ||| || |||| | | ||| | Sbjct 263462 TCCAAGGACCTGCACGACTGGAGCAACCGCCTGACCGA-CGACGAACGATACTTCGTCTC 263404 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| || ||||| || || |||||||| ||||| | |||| || Sbjct 263403 CCACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAGCG 263344 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| || | | |||||||| || ||||||||||||||||| | Sbjct 263343 CTTCA-GCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 263285 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| |||| |||||||||| || ||||||| ||||| || Sbjct 263284 TGGAGAACATCCACTCTGAGACGTACTCGCTTCTCATCGACACCTACATCAAGGAGCCGG 263225 Query 61382 C 61382 | Sbjct 263224 C 263224 Score = 149 bits (164), Expect = 5e-31 Identities = 299/443 (67%), Gaps = 3/443 (1%) Strand=Plus/Minus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 ||| || | || || || | |||||||| | || |||||||| | || ||| | || Sbjct 263059 CGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTCGCCTCTATT 263000 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || ||| | ||||| ||||| || ||||| || ||||||||| ||| ||| | || || Sbjct 262999 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTCT 262940 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 || || ||||| |||| || || || | | || ||| | | ||| ||| Sbjct 262939 CGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCAC---CTGAGGAAC 262883 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 ||||| || ||||||| || || | ||||| || | || || |||| Sbjct 262882 CGTCCAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTGTCGCCATTGAGAAGGAG 262823 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || |||| || ||| |||| | | ||| |||||||||| | || ||| |||| Sbjct 262822 TTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAGCAG 262763 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || ||||||||||||||||| |||||| | |||| | || | | || || Sbjct 262762 TACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAAGGTTTACAAG 262703 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 || ||||| || || |||||||| | || || || | ||||||||| || || || Sbjct 262702 TCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTT 262643 Query 61909 GAGAAACGTGTAGGCGACTATCA 61931 ||||| ||||| || ||||| || Sbjct 262642 GAGAAGCGTGTCGGTGACTACCA 262620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563227320400