Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18]
181 sequences; 34,986,079 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq42 508 1e-141
seq113 84.2 4e-14
>seq42
Length=10974
Score = 508 bits (562), Expect = 1e-141
Identities = 301/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 5382 TGGTTCGGCCGGGCCTTTCCTCCTGGGGATCCGCATGCCCTTCACTGGGTGTGTTGGGGA 5323
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5322 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 5263
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 5262 TAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCGCCGT 5203
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 5202 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGG 5143
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 5142 ATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 5083
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 5082 ACGAAAGTTAGGGG 5069
>seq113
Length=748166
Score = 84.2 bits (92), Expect = 4e-14
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237
||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 563370 CCGCCGTAACGATCGATAGGGATAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAA 563311
Query 238 T 238
|
Sbjct 563310 T 563310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198343488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |