Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18] 181 sequences; 34,986,079 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq42 508 1e-141 seq113 84.2 4e-14 >seq42 Length=10974 Score = 508 bits (562), Expect = 1e-141 Identities = 301/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 5382 TGGTTCGGCCGGGCCTTTCCTCCTGGGGATCCGCATGCCCTTCACTGGGTGTGTTGGGGA 5323 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5322 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 5263 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 5262 TAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCGCCGT 5203 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 5202 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGG 5143 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 5142 ATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 5083 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 5082 ACGAAAGTTAGGGG 5069 >seq113 Length=748166 Score = 84.2 bits (92), Expect = 4e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 ||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 563370 CCGCCGTAACGATCGATAGGGATAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAA 563311 Query 238 T 238 | Sbjct 563310 T 563310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198343488