Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18]
181 sequences; 34,986,079 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq42 268 1e-69
>seq42
Length=10974
Score = 268 bits (296), Expect = 1e-69
Identities = 179/198 (90%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 4231 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 4289
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| ||| || | | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 4290 GGCCCGCCAAAGCGGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 4349
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 4350 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 4409
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 4410 AAGAGCTCTCAATCTGTC 4427
Score = 93.3 bits (102), Expect = 7e-17
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3713 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATAACAG 3771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798602861
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |