Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18] 181 sequences; 34,986,079 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq42 268 1e-69 >seq42 Length=10974 Score = 268 bits (296), Expect = 1e-69 Identities = 179/198 (90%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 4231 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 4289 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || ||| || | | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 4290 GGCCCGCCAAAGCGGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 4349 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 4350 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 4409 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 4410 AAGAGCTCTCAATCTGTC 4427 Score = 93.3 bits (102), Expect = 7e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3713 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATAACAG 3771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798602861