Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18] 181 sequences; 34,986,079 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq42 434 3e-119 >seq42 Length=10974 Score = 434 bits (480), Expect = 3e-119 Identities = 271/291 (93%), Gaps = 3/291 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10033 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 10092 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 10093 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 10152 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| Sbjct 10153 GGCCCGCGAAGGACCTTAACGCCAGAAGATGGACGGTGAAGTCCAGTTCCGCTTCATTGA 10212 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 10213 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 10269 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||| | | ||| |||||||| ||| |||||||||||||||||| Sbjct 10270 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 10320 Score = 257 bits (284), Expect = 5e-66 Identities = 144/145 (99%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 10689 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 10748 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10749 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 10808 Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441 ||||||||||||||||||||||||| Sbjct 10809 ACGAGGCATTTGGCTACCTTAAGAG 10833 Score = 181 bits (200), Expect = 3e-43 Identities = 102/103 (99%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 276 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 277 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197040288