Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18]
181 sequences; 34,986,079 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq42 434 3e-119
>seq42
Length=10974
Score = 434 bits (480), Expect = 3e-119
Identities = 271/291 (93%), Gaps = 3/291 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10033 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 10092
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 10093 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 10152
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 10153 GGCCCGCGAAGGACCTTAACGCCAGAAGATGGACGGTGAAGTCCAGTTCCGCTTCATTGA 10212
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 10213 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 10269
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||| | | ||| |||||||| ||| ||||||||||||||||||
Sbjct 10270 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 10320
Score = 257 bits (284), Expect = 5e-66
Identities = 144/145 (99%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 10689 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 10748
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10749 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 10808
Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441
|||||||||||||||||||||||||
Sbjct 10809 ACGAGGCATTTGGCTACCTTAAGAG 10833
Score = 181 bits (200), Expect = 3e-43
Identities = 102/103 (99%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 276
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 277 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197040288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |