Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18]
181 sequences; 34,986,079 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq42 390 2e-106
>seq42
Length=10974
Score = 390 bits (432), Expect = 2e-106
Identities = 257/279 (92%), Gaps = 4/279 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 9208 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 9151
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9150 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 9091
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct 9090 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 9031
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
| |||||||||||| ||||| | ||| |||| ||||| | ||||||||||||||
Sbjct 9030 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGC 8972
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| ||||||||||||||||||||||||||||||
Sbjct 8971 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 8933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198563584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |