Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20corticola_20[genbank_20GCA_5F001883845.1_202016-11-18] 181 sequences; 34,986,079 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq42 390 2e-106 >seq42 Length=10974 Score = 390 bits (432), Expect = 2e-106 Identities = 257/279 (92%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 9208 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 9151 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9150 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 9091 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 9090 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 9031 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 | |||||||||||| ||||| | ||| |||| ||||| | |||||||||||||| Sbjct 9030 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGC 8972 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||||||||||||||||||||||||||| Sbjct 8971 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 8933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198563584