Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 1e-18 >seq12 Length=23289 Score = 98.7 bits (108), Expect = 1e-18 Identities = 158/225 (70%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60 ||| || ||||||| ||||||| || || | ||||| |||| ||| | |||| |||| Sbjct 6058 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTATCATCTTACGCAA 6117 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||| | |||||||||| | | ||||| ||| || | | | | Sbjct 6118 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 6173 Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | || | ||| | |||||| |||| |||| |||||||| | || |||||| Sbjct 6174 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCTCAGTTACGGAGTCAATTTGCC 6233 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTAC 222 || |||||||| | ||| | | |||||||| ||||||||||| Sbjct 6234 GAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 6278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694387292697