Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq12 129 1e-27 >seq12 Length=23289 Score = 129 bits (142), Expect = 1e-27 Identities = 196/276 (71%), Gaps = 10/276 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| || ||||||||||||||||| | | |||||||| |||||| Sbjct 5868 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 5927 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 5928 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 5987 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTTAGCTA 184 || | || ||||||| || | |||| ||| |||| | | || || ||||| Sbjct 5988 ATAGATAAGGCCGCCATTGAATGGGGGTTCCTTCAAAACCAAGCCTATTTTAGTCAGCTA 6047 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243 | ||| |||||| ||| || ||||||| || ||||| ||||| || | || || Sbjct 6048 AGTAAATCCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTATCA 6107 Query 244 TGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || ||| ||||||||||||| | |||||||||| Sbjct 6108 TCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG 6143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260776183488