Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 3e-16 >seq12 Length=23289 Score = 91.5 bits (100), Expect = 3e-16 Identities = 252/385 (65%), Gaps = 30/385 (8%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | ||| ||||||||| ||| | || ||||||||| |||||| Sbjct 5868 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 5927 Query 67 ACGCCTTTCGTGCGG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 125 | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 5928 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 5987 Query 126 ATAGTTACGGCCGCCGTTTACTGGGGCTT-----AAGTTCA--CTGCTTCGATTGCTCTA 178 |||| || ||||||| || | ||||| || || || | || | | ||| Sbjct 5988 ATAGATAAGGCCGCCATTGAATGGGGGTTCCTTCAAAACCAAGCCTATTTTAGTCAGCTA 6047 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCG-TCTTGCG 237 | | || |||||| |||| || ||||||| || || ||||| ||| | | | Sbjct 6048 AGTAAATCCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTATCA 6107 Query 238 ACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT- 295 |||| ||| | ||||||||| |||||||||| | ||||| ||| ||| Sbjct 6108 TCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTC 6167 Query 296 -----------------GTCA--TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCAT 336 ||| |||| ||||| |||| ||||| |||||||| |||| Sbjct 6168 TTCTAAACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCTCAGTTACGGAGTCAA 6227 Query 337 TTTGCCGAGTTCCTTAACAATAGTT 361 ||||||||||||||||| || ||| Sbjct 6228 TTTGCCGAGTTCCTTAATGATTGTT 6252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062379931264