Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq146 273 2e-68 seq694 136 3e-27 >seq146 Length=70891 Score = 273 bits (302), Expect = 2e-68 Identities = 447/642 (70%), Gaps = 14/642 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || || || || || | |||||||||||| | ||| ||||| || || |||||||| Sbjct 29703 GGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACG 29762 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || ||| ||| || || || ||| || || || | |||| ||| || |||||||| Sbjct 29763 ATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGG 29822 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| |||| | ||| | |||||||| || |||| ||| | ||| Sbjct 29823 TTGCAGTGATCCTTGTACAGCATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATG 29882 Query 66182 GCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTC 66234 |||| ||| || |||||| | || | ||| | || || |||| || Sbjct 29883 GCGTACCAGAGCTTCTGAGCGCGGACGGTCTC---ACGGCCACGACCCTCCTTC----TC 29935 Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 || || ||||| || ||||| || || | || || | ||| | || |||| Sbjct 29936 ATACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTC 29995 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 || || ||||| || | ||| || | ||| || ||||| ||| || |||||||| Sbjct 29996 GTTGGGGCACATAAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGG 30055 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414 |||||||| |||||||| || ||||| || || ||||| ||||||| || ||||| Sbjct 30056 AATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCG 30115 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 | |||||||| ||||||||||| |||||||| || |||||||||||||| | || Sbjct 30116 AAGATCGAGGAAACTGAAGATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACC 30175 Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534 | ||| ||| |||||| ||||| |||||||| || |||||| |||| || | ||| Sbjct 30176 CGGACGCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCAT 30235 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 || | | ||||| ||||||||||||| | ||| | || || || || Sbjct 30236 GGGAATCAAGCCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGAT 30295 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||||||||| ||||| || || || || ||||| ||||| Sbjct 30296 GCGGTGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGAT 30337 >seq694 Length=40397 Score = 136 bits (150), Expect = 3e-27 Identities = 288/424 (68%), Gaps = 7/424 (2%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||||| || || || ||| | ||||| ||| | ||||| || || Sbjct 9181 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 9122 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||||||||| || ||| ||| || | || || || || ||||||||||| Sbjct 9121 CTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGTGATGAGGGCATGCACACC 9062 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTCGGAGGAGCGTGT 61688 || ||||| |||| ||| | | ||| || ||| | | |||| ||| Sbjct 9061 GACTTTGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGCCCAGCCCCGAGGC---TGT 9006 Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747 | ||| | || | ||||| || |||||| |||| || ||||| || || ||| Sbjct 9005 CGA-GAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGC 8947 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 | ||| | || ||||||||||| || |||| ||||| || || || || || | Sbjct 8946 CTGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTG 8887 Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 |||| |||||||| | | || | ||| | ||| || | | ||||| || || | Sbjct 8886 ACCGCCTGTTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACT 8827 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||||| | |||||||| |||||||| || || |||||||| ||||| || |||| Sbjct 8826 TCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACT 8767 Query 61928 ATCA 61931 | || Sbjct 8766 ACCA 8763 Score = 123 bits (136), Expect = 2e-23 Identities = 209/297 (70%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | |||||| | || | Sbjct 9660 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 9601 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | ||| || || | ||||| Sbjct 9600 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 9542 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| ||||| || ||||| || ||||| | | || || Sbjct 9541 CCACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCG 9482 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | | |||| || | | ||||| || || ||||||||||||||||| | Sbjct 9481 CTTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 9423 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| |||||||||||| ||| | |||||||| |||||||| || |||| Sbjct 9422 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGC 9366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558847114960