Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2701 1036 0.0 >seq2701 Length=8472 Score = 1036 bits (1148), Expect = 0.0 Identities = 630/667 (94%), Gaps = 0/667 (0%) Strand=Plus/Minus Query 17 TAGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAG 76 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5002 TAGCCATGTGAATCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAG 4943 Query 77 GTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 136 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4942 GTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 4883 Query 137 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 4882 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAA 4823 Query 197 GCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTC 256 ||||||||||||||||||| ||||||||||||| |||| | | | |||| | ||||||| Sbjct 4822 GCGCTTGCAACCAGACTTGTCCGCAGTTGCTCAGCCGGTCTCCTGACCGGCGTACTCTTC 4763 Query 257 TGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCT 316 ||||| |||||||||||||| |||||||||||||||||| || ||||||||| || || Sbjct 4762 TGCGGCCAGGCCAGCATCAGTTCGGGCGGTCGGATAAAGACCTCGGGAATGTAGCTCCTC 4703 Query 317 TCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG 376 |||||| |||||||||||||||||||||||||||| ||||||||||||| | |||| || Sbjct 4702 TCGGGGAGTGTTATAGCCCGGGGTGGAATGCGGCCAGCCTGGACTGAGGATCTCGCTTCG 4643 Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4642 GCAAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCT 4583 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 4582 AACATCTATGCGAGTGTTTGGGTGTCAAACCCATACGCGTAATGAAAGTGAACGGAGGTG 4523 Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 4522 GGAACCCGCAAGGGTGCACCATCGGCCGATCCTGATGTCTTCGGATGGATTTGAGCAAGA 4463 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4462 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 4403 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4402 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATA 4343 Query 677 GGGGCGA 683 ||||||| Sbjct 4342 GGGGCGA 4336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079919090600