Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq2701 100 2e-19
seq872 95.1 7e-18
>seq2701
Length=8472
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 5857 TCCGAAGGC-CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5913
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 5914 GGCAGGGACGTAAT-CAACGCATGCT 5938
>seq872
Length=10998
Score = 95.1 bits (104), Expect = 7e-18
Identities = 70/78 (90%), Gaps = 3/78 (4%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 89 TCCGAAGGC-CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 33
Query 99 GGCAGGGACGTAATACAA 116
||||||||||||||| ||
Sbjct 32 GGCAGGGACGTAATAAAA 15
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300789362960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |