Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2701 390 2e-106 seq3573 78.8 2e-12 >seq2701 Length=8472 Score = 390 bits (432), Expect = 2e-106 Identities = 257/279 (92%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2253 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2196 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2195 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2136 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 2135 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 2076 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 | |||||||||||| ||||| | ||| |||| ||||| | |||||||||||||| Sbjct 2075 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGC 2017 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||||||||||||||||||||||||||| Sbjct 2016 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 1978 >seq3573 Length=1988 Score = 78.8 bits (86), Expect = 2e-12 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCA 272 ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1943 GCTGGCGGATTGCAATTTCACAATGCGCAGGGATAAATCCTTTGCA 1988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819170065408