Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq313 264 9e-66
seq794 145 6e-30
>seq313
Length=54589
Score = 264 bits (292), Expect = 9e-66
Identities = 445/642 (69%), Gaps = 14/642 (2%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| || || || || || | |||||||||||| | ||| ||||| || || ||||||||
Sbjct 34326 GGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACG 34385
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| ||| ||| || || || ||| || || || | |||| ||| || ||||||||
Sbjct 34386 ATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGG 34445
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| |||| | || | || ||||| || |||| ||| | |||
Sbjct 34446 TTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATG 34505
Query 66182 GCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTC 66234
|||| ||| || |||||| || || | ||| | || || |||| ||
Sbjct 34506 GCGTACCAGAGCTTCTGAGCGCGGACCGTCTC---ACGGCCGCGACCCTCCTTC----TC 34558
Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294
||| || ||||| || ||||| || || | || || | ||| | || ||||
Sbjct 34559 GTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTC 34618
Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354
|| || ||||| || | ||| || | ||| || ||||| ||| || ||||||||
Sbjct 34619 GTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGG 34678
Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414
|||||||| |||||||| || ||||| || || ||||| ||||||| || |||||
Sbjct 34679 AATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCG 34738
Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474
| |||||||| |||| |||||| |||||||| || |||||||||||||| | ||
Sbjct 34739 AAGATCGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACC 34798
Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534
| ||| ||| |||||| ||||| |||||||| || |||||| |||| || | |||
Sbjct 34799 CGGACGCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCAT 34858
Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594
|| | | ||||| ||||||||||||| | ||| | || || || ||
Sbjct 34859 GGGAATCAAGCCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGAT 34918
Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
|||||||| ||||| || || || || ||||| |||||
Sbjct 34919 GCGATGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGAT 34960
>seq794
Length=14906
Score = 145 bits (160), Expect = 6e-30
Identities = 290/424 (68%), Gaps = 7/424 (2%)
Strand=Plus/Plus
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
||||||||| | || ||||| || || || ||| | ||||| ||| | ||||| || ||
Sbjct 5301 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 5360
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
|| ||||||||||| |||||| ||| ||| | || || || || |||||||||||
Sbjct 5361 CTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACACC 5420
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTCGGAGGAGCGTGT 61688
|| ||||| |||| ||| | | ||| || ||| | | |||| |||
Sbjct 5421 GACTTTGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGCCCAGCCCCGAGGC---TGT 5476
Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747
| ||| | || | ||||| || |||||| |||| || ||||| || || |||
Sbjct 5477 TGA-GAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGC 5535
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
||||| | || ||||||||||| || |||| ||||| || || || || || |
Sbjct 5536 CCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGG 5595
Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867
|||| ||| |||| | | || | ||| | ||| || | | ||||| || || |
Sbjct 5596 ACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACT 5655
Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927
||||||| | |||||||| |||||||| || || |||||||| ||||| || ||||
Sbjct 5656 TCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACT 5715
Query 61928 ATCA 61931
| ||
Sbjct 5716 ACCA 5719
Score = 127 bits (140), Expect = 2e-24
Identities = 210/297 (71%), Gaps = 7/297 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || |||||||||||||| | |||||| | || |
Sbjct 4822 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 4881
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||| | | |||||| | ||| | | ||| || || | |||||
Sbjct 4882 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 4940
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || | || ||||| ||||| ||||| || ||||| || ||||| | | || ||
Sbjct 4941 CCACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCG 5000
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | | |||| || | | ||||| || || ||||||||||||||||| |
Sbjct 5001 CTTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 5059
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| |||||||||||| ||| | |||||||| |||||||| || ||||
Sbjct 5060 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGC 5116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397549723302080
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