Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq313 264 9e-66 seq794 145 6e-30 >seq313 Length=54589 Score = 264 bits (292), Expect = 9e-66 Identities = 445/642 (69%), Gaps = 14/642 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || || || || || | |||||||||||| | ||| ||||| || || |||||||| Sbjct 34326 GGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACG 34385 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || ||| ||| || || || ||| || || || | |||| ||| || |||||||| Sbjct 34386 ATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGG 34445 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| |||| | || | || ||||| || |||| ||| | ||| Sbjct 34446 TTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATG 34505 Query 66182 GCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTC 66234 |||| ||| || |||||| || || | ||| | || || |||| || Sbjct 34506 GCGTACCAGAGCTTCTGAGCGCGGACCGTCTC---ACGGCCGCGACCCTCCTTC----TC 34558 Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 ||| || ||||| || ||||| || || | || || | ||| | || |||| Sbjct 34559 GTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTC 34618 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 || || ||||| || | ||| || | ||| || ||||| ||| || |||||||| Sbjct 34619 GTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGG 34678 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414 |||||||| |||||||| || ||||| || || ||||| ||||||| || ||||| Sbjct 34679 AATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCG 34738 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 | |||||||| |||| |||||| |||||||| || |||||||||||||| | || Sbjct 34739 AAGATCGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACC 34798 Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534 | ||| ||| |||||| ||||| |||||||| || |||||| |||| || | ||| Sbjct 34799 CGGACGCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCAT 34858 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 || | | ||||| ||||||||||||| | ||| | || || || || Sbjct 34859 GGGAATCAAGCCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGAT 34918 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 |||||||| ||||| || || || || ||||| ||||| Sbjct 34919 GCGATGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGAT 34960 >seq794 Length=14906 Score = 145 bits (160), Expect = 6e-30 Identities = 290/424 (68%), Gaps = 7/424 (2%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||||| || || || ||| | ||||| ||| | ||||| || || Sbjct 5301 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 5360 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||||||||| |||||| ||| ||| | || || || || ||||||||||| Sbjct 5361 CTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACACC 5420 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTCGGAGGAGCGTGT 61688 || ||||| |||| ||| | | ||| || ||| | | |||| ||| Sbjct 5421 GACTTTGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGCCCAGCCCCGAGGC---TGT 5476 Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747 | ||| | || | ||||| || |||||| |||| || ||||| || || ||| Sbjct 5477 TGA-GAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGC 5535 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 ||||| | || ||||||||||| || |||| ||||| || || || || || | Sbjct 5536 CCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGG 5595 Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 |||| ||| |||| | | || | ||| | ||| || | | ||||| || || | Sbjct 5596 ACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACT 5655 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||||| | |||||||| |||||||| || || |||||||| ||||| || |||| Sbjct 5656 TCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACT 5715 Query 61928 ATCA 61931 | || Sbjct 5716 ACCA 5719 Score = 127 bits (140), Expect = 2e-24 Identities = 210/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| | || | Sbjct 4822 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 4881 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | ||| || || | ||||| Sbjct 4882 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 4940 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| ||||| || ||||| || ||||| | | || || Sbjct 4941 CCACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCG 5000 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | | |||| || | | ||||| || || ||||||||||||||||| | Sbjct 5001 CTTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 5059 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| |||||||||||| ||| | |||||||| |||||||| || |||| Sbjct 5060 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGC 5116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397549723302080