Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq365 168 3e-36 >seq365 Length=7467 Score = 168 bits (186), Expect = 3e-36 Identities = 372/549 (68%), Gaps = 13/549 (2%) Strand=Plus/Minus Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698 ||||||||||| ||| | || |||| ||||| ||||| | ||||| ||||||| || Sbjct 5628 GGCGCCGTAGGCGATGAGGCAGTCGCGTTCCATCTCGCCGAGGCGGAGGCCGCCGTCGCG 5569 Query 448699 CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTG 448758 | ||||||||||||||| || ||||||| | | ||| || | | |||| ||| Sbjct 5568 GGAGCGGCCCTCGGTGGGCTGGCGGGTGAGGATGGCGCGCGGCCCGCGCGCGCGCGAGTG 5509 Query 448759 CATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCG 448818 |||||| ||| ||| |||||||| ||||| || ||| ||| || |||| | | Sbjct 5508 CATCTTGTCCTGCACCATGTGCTTGAGCTTCTGGTAGTAGATGGGGCCGAAGAAGACGTA 5449 Query 448819 GCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGAT 448878 | ||||| | ||||||||| ||| ||| | || ||||||| | | ||| Sbjct 5448 GGCCGGCAGCGACTCGCCCGTGATGCCCGACGTGAGCATGTCCTTGCCC--GAGTACGAG 5391 Query 448879 CATGCCCCTCTCCTCCATGTAGTCC---ATGAGCTCGGCCACGGAGAGGTCCGAAAAGGC 448935 | || || ||| || | | | ||| ||||||| | | | ||||| | Sbjct 5390 AAGCCCGCT-TCCAGCAGGATCTGCGACATGTCCTCGGCCTTGCTGCCG-CCGAA--GCA 5335 Query 448936 CGTGCCGTCCTGCGGCAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAA 448995 |||||||| |||| | ||||| | | ||||| || || || ||| |||| Sbjct 5334 CGTGCCGTACTGCAGGTCGCCGCCCACCACGCCCGCCTTGCCCGACAGCAGCTCCAGCAT 5275 Query 448996 CATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGT-CGGGC-GTC 449053 | || | ||||||||||||||| | | ||||||||||||||||||| ||||| | Sbjct 5274 CTTGCCCACCGTCATGCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCCGGGCAGAT 5215 Query 449054 TCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTC 449113 || | || ||||||| ||||||||| | | | | | | |||| ||||||||| Sbjct 5214 TCCCTGG--TCGTTGAACGGCATGTCCGTTTGCTCGGCGATGATGCCGACGACGCCCTTT 5157 Query 449114 TGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACG 449173 || ||||||||| |||||||||| ||| |||||||| ||| || ||| | | Sbjct 5156 TGCCCGTGGCGGGACGAGAACTTGTCGCCCAGCTCGGGCCGGCGCGTTTGCCGCGTCTGG 5097 Query 449174 ATCTTGATG 449182 ||||||||| Sbjct 5096 ATCTTGATG 5088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084635989774056