Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq664 260 1e-64 seq204 154 1e-32 >seq664 Length=348155 Score = 260 bits (288), Expect = 1e-64 Identities = 444/642 (69%), Gaps = 14/642 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || || || || || | |||||||||||| | ||| || || || || |||||||| Sbjct 292724 GGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACG 292783 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || ||| ||| || || || ||| || || || | |||| ||| || |||||||| Sbjct 292784 ATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGG 292843 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| |||| | || | |||||||| || |||| ||| | ||| Sbjct 292844 TTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATG 292903 Query 66182 GCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTC 66234 |||| |||||| |||||| | || | ||| | || || |||| || Sbjct 292904 GCGTACCAAAGCTTCTGAGCGCGGACGGTCTC---ACGGCCGCGACCCTCCTTC----TC 292956 Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 ||| || ||||| || ||||| || || | || || | ||| | || |||| Sbjct 292957 GTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTC 293016 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 || || ||||| || | ||| || | ||| || ||||| ||| || |||||||| Sbjct 293017 GTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGG 293076 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414 |||||||| |||||||| || ||||| || || ||||| ||||||| || ||||| Sbjct 293077 AATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCG 293136 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 | || ||||| |||| |||||| |||||||| || |||||||||||||| | || Sbjct 293137 AAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACC 293196 Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534 | ||| ||| |||||| ||||| |||||||| || |||||| |||| || | ||| Sbjct 293197 CGGACGCTTGTTGCCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCAT 293256 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 || | | ||||| |||| |||||||| | ||| | || || || || Sbjct 293257 GGGAATCAAGCCGTTGCTAGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGAT 293316 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||||||||| ||||| || || || || ||||| ||||| Sbjct 293317 GCGGTGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGAT 293358 >seq204 Length=141573 Score = 154 bits (170), Expect = 1e-32 Identities = 292/424 (69%), Gaps = 7/424 (2%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||||| || || || ||| | ||||| ||| | ||||| || || Sbjct 65795 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 65854 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 |||||||||||||| |||||| ||| ||| | || || || || ||||||||||| Sbjct 65855 CTTATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACACC 65914 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTCGGAGGAGCGTGT 61688 || ||||| |||| ||| | | ||| || ||| | | |||| ||| Sbjct 65915 GACTTTGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGCCCAGCCCCGAGGC---TGT 65970 Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747 | ||| | || | ||||| || |||||| |||| || ||||| || || ||| Sbjct 65971 TGA-GAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGC 66029 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 ||||| | || ||||||||||| || |||| ||||| || || || || || | Sbjct 66030 CCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGG 66089 Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 |||| ||| |||| | | || | ||| | ||| || | | ||||| || || | Sbjct 66090 ACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACT 66149 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||||| | |||||||| ||||||||| || || |||||||| ||||| || |||| Sbjct 66150 TCATGGAGAACATTTCGCTCAGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACT 66209 Query 61928 ATCA 61931 | || Sbjct 66210 ACCA 66213 Score = 127 bits (140), Expect = 2e-24 Identities = 210/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | |||||| | ||| | Sbjct 65316 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTC 65375 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | ||| || || | ||||| Sbjct 65376 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 65434 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| ||||| || ||||| || ||||| | | || || Sbjct 65435 CCACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCG 65494 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | | |||| || | | ||||| || || ||||||||||||||||| | Sbjct 65495 CTTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 65553 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| |||||||||||| ||| | |||||||| |||||||| || |||| Sbjct 65554 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGC 65610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564637320160