Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq312 96.9 1e-14 >seq312 Length=273352 Score = 96.9 bits (106), Expect = 1e-14 Identities = 341/523 (65%), Gaps = 21/523 (4%) Strand=Plus/Plus Query 448639 GGCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCG 448698 ||||||||| | ||| | | |||| ||||| ||||| | || || || |||| || Sbjct 174637 GGCGCCGTACGCAATGAGGCAATCGCGTTCCATCTCGCCGAGGCGCAGTCCACCGTCGCG 174696 Query 448699 CAACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTG-- 448756 | | || |||||||| || || ||||||| | | ||| ||| | | |||| | Sbjct 174697 CGAACGACCTTCGGTGGGTTGGCGGGTGAGGATGGCG--CGGGGCCCGCGGGCGCGCGAG 174754 Query 448757 TGCATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATG 448816 |||||||| ||| | ||| |||||||| ||||| || | | ||| || |||| | | Sbjct 174755 TGCATCTTGTCCTGGACCATGTGCTTGAGCTTCTGGTAGTATATGGGGCCGAAGAAGACG 174814 Query 448817 CGGCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCG 448876 | || | | |||||| || ||| ||| | || ||||||| | | || Sbjct 174815 TAGGCGGGGAGCGACTCGCCGGTGATGCCCGACGTGAGCATGTCCTTGCCC--GAGTACG 174872 Query 448877 ATCATGCCCCTCTCCTCCATGT-AGTC-----CATGAGCTCGGCCACGGAGAGGTCCGAA 448930 | | | || |||| | | || |||| ||||||| | | | ||||| Sbjct 174873 AGAAGCCGGCT----TCCAAGAGAATCTGCGACATGTCCTCGGCCCTGCTGCCG-CCGAA 174927 Query 448931 AAGGCCGTGCCGTCCTGCGGCAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGGCCTCG 448990 | |||||||| |||| | ||||| | ||||| || || || ||| Sbjct 174928 --GCACGTGCCGTACTGCAGGTCGCCGCCGACCACGCCCGCCTTGCCCGACAGCAGCTCC 174985 Query 448991 AGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGT-CGGG 449049 |||| | || | ||||||||||||||| || | ||||||||||||||||||| |||| Sbjct 174986 AGCATCTTGCCCACCGTCATGCGCGACGGGAAGCCGTGCGGGTTCATGATGATGTCCGGG 175045 Query 449050 CGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCC 449109 | | ||| ||||||| ||||||||| | | | | | | |||| |||||| Sbjct 175046 CAGAT-GCCTTGGTCGTTGAACGGCATGTCCGTCTGCTCGGCGATGATGCCGACGACGCC 175104 Query 449110 CTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152 ||| || ||||| || |||||||||| ||| |||||||| Sbjct 175105 CTTTTGCCCGTGCCGCGACGAGAACTTGTCGCCCAGCTCGGGC 175147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084720210631812