Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq90 351 3e-94 >seq90 Length=3078 Score = 351 bits (388), Expect = 3e-94 Identities = 282/333 (85%), Gaps = 12/333 (4%) Strand=Plus/Plus Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 1 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 60 Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA----AGG--G 293 || |||||||||||| ||| |||||| |||||||| || |||| || || | Sbjct 61 CAGAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 118 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTATT 352 ||| | ||||||||||||||| | ||||||| |||||||||||| | ||| ||||| Sbjct 119 CGTCGACCTTTTATCTAATAAATGCGTCCCTTCCATAAGTCGGGGTTTGTTGCACGTATT 178 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| |||||| | ||| |||||| |||| |||||||| Sbjct 179 AGCTCTAGAATTACTACGGTTATCCGAGTAGTA-GTTACCATCAAACAAACTATAACTGA 237 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||| || | ||| || ||||||| |||||||||||| Sbjct 238 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 297 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 298 TAATCTTTGAGACAAGCATATGACTACTGGCAG 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398263040