Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq111 260 1e-64 >seq111 Length=3622730 Score = 260 bits (288), Expect = 1e-64 Identities = 444/642 (69%), Gaps = 14/642 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || || || || || | |||||||||||| | ||| || || || || |||||||| Sbjct 919876 GGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACG 919817 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || ||| ||| || || || ||| || || || | |||| ||| || |||||||| Sbjct 919816 ATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGG 919757 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| |||| | || | |||||||| || |||| ||| | ||| Sbjct 919756 TTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATG 919697 Query 66182 GCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTC 66234 |||| |||||| |||||| | || | ||| | || || |||| || Sbjct 919696 GCGTACCAAAGCTTCTGAGCGCGGACGGTCTC---ACGGCCGCGACCCTCCTTC----TC 919644 Query 66235 GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 ||| || ||||| || ||||| || || | || || | ||| | || |||| Sbjct 919643 GTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTC 919584 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 || || ||||| || | ||| || | ||| || ||||| ||| || |||||||| Sbjct 919583 GTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGG 919524 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414 |||||||| |||||||| || ||||| || || ||||| ||||||| || ||||| Sbjct 919523 AATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCG 919464 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 | || ||||| |||| |||||| |||||||| || |||||||||||||| | || Sbjct 919463 AAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACC 919404 Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534 | ||| ||| |||||| ||||| |||||||| || |||||| |||| || | ||| Sbjct 919403 CGGACGCTTGTTGCCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCAT 919344 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 || | | ||||| |||| |||||||| | ||| | || || || || Sbjct 919343 GGGAATCAAGCCGTTGCTAGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGAT 919284 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||||||||| ||||| || || || || ||||| ||||| Sbjct 919283 GCGGTGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGAT 919242 Score = 145 bits (160), Expect = 6e-30 Identities = 290/424 (68%), Gaps = 7/424 (2%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||||| || || || ||| | ||||| ||| | ||||| || || Sbjct 146858 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 146799 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||||||||| |||||| ||| ||| | || || || || ||||||||||| Sbjct 146798 CTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGCATGCACACC 146739 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTCGGAGGAGCGTGT 61688 || ||||| |||| ||| | | ||| || ||| | | |||| ||| Sbjct 146738 GACTTTGCCTGCCTGCTGTTCTCGCAC-ATCAAGTCGAAGCCCAGCCCCGAGGC---TGT 146683 Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747 | ||| | || | ||||| || |||||| |||| || ||||| || || ||| Sbjct 146682 TGA-GAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGC 146624 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 ||||| | || ||||||||||| || |||| ||||| || || || || || | Sbjct 146623 CCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGG 146564 Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 |||| ||| |||| | | || | ||| | ||| || | | ||||| || || | Sbjct 146563 ACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACT 146504 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||||| | |||||||| |||||||| || || |||||||| ||||| || |||| Sbjct 146503 TCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACT 146444 Query 61928 ATCA 61931 | || Sbjct 146443 ACCA 146440 Score = 127 bits (140), Expect = 2e-24 Identities = 210/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| |||||||| ||||| |||||||| | |||||| | || | Sbjct 147337 ATCTGGCAGATGTACAAGAAGGCGGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 147278 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | ||| || || | ||||| Sbjct 147277 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 147219 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| ||||| || ||||| || ||||| | | || || Sbjct 147218 CCACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCG 147159 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | | |||| || | | ||||| || || ||||||||||||||||| | Sbjct 147158 CTTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 147100 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| |||||||||||| ||| | |||||||| |||||||| || |||| Sbjct 147099 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGC 147043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567442783600