Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq105 98.7 3e-18 >seq105 Length=34738 Score = 98.7 bits (108), Expect = 3e-18 Identities = 190/279 (68%), Gaps = 10/279 (4%) Strand=Plus/Minus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 |||| |||| ||||| ||| ||||||||||||| | | |||||||| ||| Sbjct 18877 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 18818 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 |||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| Sbjct 18817 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 18758 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC--------GTTAG 181 | || | || ||||||| || | |||| ||| |||| | || | | || Sbjct 18757 TCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAAACCTAGCCTACTAAAATTCAG 18698 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240 |||| ||| |||||| || || ||||||| |||||| | |||| | | || Sbjct 18697 CTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATTTA 18638 Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | || |||| |||||| |||||| | |||||||||| Sbjct 18637 TAATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 18599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260798222272