Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq80 338 5e-88
seq55 253 2e-62
>seq80
Length=246247
Score = 338 bits (374), Expect = 5e-88
Identities = 1240/1906 (65%), Gaps = 68/1906 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGAT---CGCATTAGCAGCCGCCTTG-GTCCTAAGATAGTACATGCC 65133
||||| ||||||||||| ||| |||||| ||| || | || |||||||||||
Sbjct 191086 TCGACAGTGAACTGGATTGGCGCTGAAGCAGC----TTGCGTTCGGAGGTAGTACATGCC 191141
Query 65134 GGTCTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATT 65190
|||||||| || ||| |||| || ||| ||||| | || |||| |||| || ||
Sbjct 191142 AGTCTTGAGACCGAGCTT-CCAACCAGCGAAGTGCAT-GCTGGTAATCTTGCCCATGGTT 191199
Query 65191 CGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGC 65250
||||| || || || ||||| |||| ||| ||||| || |||||| || ||
Sbjct 191200 -GGCTCCTTCATGTGGATGTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGC 191258
Query 65251 AGCCATGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAG-GC---GA 65305
|||||| | | ||| ||| | | | |||||||||||||||||||| || || ||
Sbjct 191259 AGCCATCTGCACGATGTTACG-CTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGA 191317
Query 65306 CGTACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGA 65365
|| | || |||||| | ||| ||| | || ||| || || |||||
Sbjct 191318 GGT-CGTC---TGGAATGTTGGGGATGCGCTGAATGGAGCCATTGTCAGCGATGATGCGG 191373
Query 65366 TTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGA 65422
|| ||| ||||||||| | || |||| |||| | ||| | | || |
Sbjct 191374 TTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGAGATCCTTCAGAAGCCA-TG--GG 191430
Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482
|||| ||| ||||||||||| | || |||||||| || |||||| ||| ||
Sbjct 191431 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 191490
Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542
|| ||| | || | ||| | || || | || || || |||||||| || || ||
Sbjct 191491 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 191550
Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC 65602
| | ||||| |||| |||| | | || ||| | | || |||||| |||
Sbjct 191551 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 191610
Query 65603 ATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACT 65658
| ||| | | | | | | | ||||| || | || || || ||||||
Sbjct 191611 A--GGTCGGTAGGAGTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACT 191664
Query 65659 GGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGT 65718
|| || || || | | ||||| || || || ||||| | || |
Sbjct 191665 GGA----GAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGC 191720
Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATC 65778
||| || || ||| ||| |||||||| ||||| | ||||| || ||||||
Sbjct 191721 CTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGG 191780
Query 65779 GCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACC 65838
||| | ||||| | | | || | || || ||||| | || |||| |||
Sbjct 191781 CGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACC 191840
Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898
||||| || || || || ||| || ||||| ||||| |||||||| ||||| ||
Sbjct 191841 AATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTC 191900
Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAAT 65957
||| | |||| || ||||| ||||| | || ||| | | || | ||| |
Sbjct 191901 GATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGT-GAAGTTTCTTGAAGT 191959
Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017
||||| | || || || || || || | |||| || ||||| || |
Sbjct 191960 CAAAAACCT-----CGTTCTCGA-TGTCG------ACGTAGGTGGGCAGAGCAAGCGAAG 192007
Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077
| || ||||||||||| | ||| || ||||| | ||||| | || || ||||||| ||
Sbjct 192008 CCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAAT 192067
Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137
|| || |||||||| | ||||| || || |||||||| ||| || |||||||
Sbjct 192068 TAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGT 192127
Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197
||| ||| | || ||||||||||| || | ||| | || || | ||| |
Sbjct 192128 ACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCT 192187
Query 66198 GTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCG 66256
| || ||||| | || ||||| |||| | || ||| | ||||| || | | |
Sbjct 192188 GAGCACGAACCGT-CTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 192246
Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316
|| ||||| | || || ||||||| || || | || || |||||||| | ||||
Sbjct 192247 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAA 192306
Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376
|| | |||||| ||||| ||||||| ||||| || |||||||| |||||||| | |
Sbjct 192307 GTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAA 192366
Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436
||||| || || || || | || || || ||||| | ||| | ||||| | || |
Sbjct 192367 TCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACG 192426
Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496
|| |||||||| || || ||||||||||| || | || ||| ||| |||||| |||
Sbjct 192427 TCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGG 192486
Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556
|| ||||| ||||| ||||| |||| || | ||| ||||| || ||||| ||| ||
Sbjct 192487 TCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 192546
Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616
|| || |||||| | ||| || ||| |||| || | |||||||| |||||||||
Sbjct 192547 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATA 192606
Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGCCACTGTCCGGAATATGCCGTCAAT 66675
|| || || |||| ||||| ||||| ||| | || | | || || |||||
Sbjct 192607 CCGCCAGCGTTCTTGGAGATCATGGCACATATC-TTGAGGGTATCGTAGATACCATCAAT 192665
Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735
| |||| |||| |||| || | | |||| || || || | | || || | ||
Sbjct 192666 GCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGC 192725
Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795
||| || || || | ||| || || ||||| | |||||||| ||||| |||||
Sbjct 192726 ACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTC 192785
Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATT 66854
|| | || ||||||| ||| |||||||| |||| | |||| ||||| | | | ||
Sbjct 192786 AATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACA-CGCATGATCATCTGTT 192844
Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGA--TATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912
| || | ||| || || || | | | || | | ||| || || ||||| |||||
Sbjct 192845 GCGGTCTCTCG-GCAACCTTGCCGTCAATTCTG-AGAAGGTATGATCGCTCCAGAGTCTT 192902
Query 66913 GATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958
|| || |||||| ||| ||||| ||| ||| || ||||||
Sbjct 192903 GAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCC 192948
>seq55
Length=2050790
Score = 253 bits (280), Expect = 2e-62
Identities = 584/860 (68%), Gaps = 30/860 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||||||||| || || || |||||||| | |||||| | ||| ||
Sbjct 265967 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 265908
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
|| || || | | |||||| | ||| | | ||| || |||| | |||||
Sbjct 265907 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGA-CGACGAACGATTCTTCATCTC 265849
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
||| || | || ||||| ||||| || || || || ||||| ||||| | | || ||
Sbjct 265848 ACACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCG 265789
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | | ||||||| | ||||||| || || ||||||||||||||||| |
Sbjct 265788 CTTCAGCTCTG-AGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 265730
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| ||||||| |||| || ||||||||||||| |||||||| ||||
Sbjct 265729 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 265670
Query 61382 CGGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GG 61434
| | | |||| || |||||||||||||||| | || || || | | ||
Sbjct 265669 AGCA--GCGAAC-ATACCTGTTCAATGCCATCGACAACATCCC----ATGCATCCGCAGG 265617
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATT 61493
|| || || ||||| || ||||| | | | ||| | ||||| | || |
Sbjct 265616 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAAC-TCGACATTCGCCCTCCGTCT 265558
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| |||||||| | || |||||| | || ||| |||||| ||||| || ||||| ||
Sbjct 265557 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 265498
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
| ||||||||||||| || ||| |||| || || ||| || ||| | || || || ||
Sbjct 265497 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 265438
Query 61614 CGAGGGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC 61672
||||||||||| || || | ||| || || ||| ||| ||||| ||| |
Sbjct 265437 TGAGGGCATGCACACAGACTTCGCCTGCCTT-CTGTTC--TCGC-ATCTGAAGAACAAGC 265382
Query 61673 CGTCGGAGGAGCGTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731
|| ||| | ||| | ||| || | ||||| || || ||||| ||||| ||
Sbjct 265381 CGAACCAGGCCCTTGT-GCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTC 265323
Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
|||| |||||| | || | || | || ||||| || || ||||| || ||
Sbjct 265322 TTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGACCTCATGTCACAATAC 265263
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
|||||||| || ||||| || || || | | | || | ||| | |||| || |
Sbjct 265262 ATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCTACAACGCC 265203
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
| ||||| || || |||||||| | |||||||||| |||||||| || || ||||||
Sbjct 265202 ACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAG 265143
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| ||||| ||||| || ||
Sbjct 265142 AAGCGTGTTGGCGAGTACCA 265123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567316804240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |