Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq64 843 0.0 >seq64 Length=5508 Score = 843 bits (934), Expect = 0.0 Identities = 584/656 (89%), Gaps = 7/656 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1937 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 1878 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1877 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 1818 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1817 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 1758 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 ||||||| || | || || |||| | | ||||| |||| || | | |||| Sbjct 1757 CAGACTTCGTAGC-GATGTTCCGCCGGTCTTCTGACCGGTCTACTCATC-GTCGCGAGGC 1700 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 || |||| || |||| | |||| ||| || ||||||| || || ||||| |||| Sbjct 1699 CAACATCGTCTGGGGCCGCTGGAT-AAGACCTAAGGAATGTAGCTTCCCTCGGGAAGTGT 1641 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||||| | |||| |||| || | || | |||||||||||| |||| |||||| | Sbjct 1640 TATAGCCTGTGGTG--ATGCAGCGTGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGTT 1583 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1582 GGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGC 1523 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507 ||||||| ||||||||||||| | ||||||||||||||||||||||||||||| | | Sbjct 1522 GAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAAGC--GCA 1465 Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1464 AGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTT 1405 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1404 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 1345 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1344 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079987773500