Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq222 93.3 7e-17 >seq222 Length=508843 Score = 93.3 bits (102), Expect = 7e-17 Identities = 104/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 |||||||| | ||| ||||| | | || | || ||||| || || ||||||| || || Sbjct 294380 AGCACCGCCATGAACGCTTCCT-GCGGCACCTCTACGTTACCAACCTGCTTCATCCGCTT 294438 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 ||||| |||| |||||||||||||| || || || || | ||||||||| || || Sbjct 294439 CTTACCTTCCTTCTGCTTCTCAAGCAGTTTCCGTTTCCGCGAGATGTCACCGCCATAACA 294498 Query 210 TTTGGCCAGTACGTTCTT 227 ||||| |||||||| || Sbjct 294499 CTTGGCAAGTACGTTTTT 294516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838370345792