Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq2873 98.7 2e-18 >seq2873 Length=797338 Score = 98.7 bits (108), Expect = 2e-18 Identities = 121/162 (75%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 256 TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCC-AGA 314 ||| |||||||||| ||||||||| || ||| |||| | ||||| || || | Sbjct 99 TATTCGGTATTAGCTACCGTTTCCGGTAGTTGTCCCAAGCTTGAGGGCAGGTTGCCTACG 158 Query 315 CATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT--TCCTGTTACCGTT 372 ||||||||||||||||| || | || || |||||||| || || || ||| | Sbjct 159 TGTTACTCACCCGTCCGCCGCTAACTATCGGAGAAGCAAGCTTCTCTTCAAGT--CCGCT 216 Query 373 CGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||| |||||| |||||||||||||| ||||| Sbjct 217 CGACTTGCATGTATTAGGCATGCCGCCAGCGTTCGTCCTGAG 258 Score = 98.7 bits (108), Expect = 2e-18 Identities = 121/162 (75%), Gaps = 5/162 (3%) Strand=Plus/Minus Query 256 TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCC-AGA 314 ||| |||||||||| ||||||||| || ||| |||| | ||||| || || | Sbjct 797240 TATTCGGTATTAGCTACCGTTTCCGGTAGTTGTCCCAAGCTTGAGGGCAGGTTGCCTACG 797181 Query 315 CATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT--TCCTGTTACCGTT 372 ||||||||||||||||| || | || || |||||||| || || || ||| | Sbjct 797180 TGTTACTCACCCGTCCGCCGCTAACTATCGGAGAAGCAAGCTTCTCTTCAAGT--CCGCT 797123 Query 373 CGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||| |||||| |||||||||||||| ||||| Sbjct 797122 CGACTTGCATGTATTAGGCATGCCGCCAGCGTTCGTCCTGAG 797081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222356763712