Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq3414 682 0.0
>seq3414
Length=148627
Score = 682 bits (756), Expect = 0.0
Identities = 968/1354 (71%), Gaps = 38/1354 (3%)
Strand=Plus/Plus
Query 1630 AATGTGTAAAAAATTTTAACTCATAAGGAGAGTATTG-TAATGTCAATTATTACTGATGT 1688
||| | ||| |||||| || | | ||||||| ||| | ||| | |||||| |||| ||
Sbjct 46750 AATTTTTAATAAATTTAAATTTA-AAGGAGATTATCACTCATGACTATTATTTCTGACGT 46808
Query 1689 CTACGCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACAC 1748
||||| || |||||||| ||||| ||||||||||| ||| ||||||| ||||| |||
Sbjct 46809 GTACGCTCGCGAAGTCCTCGACTCCCGCGGTAACCCTACAGTTGAAGTTGAAGTATACCT 46868
Query 1749 TGAATCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGA 1808
|| || || ||| |||| |||| ||| || || || || ||||| ||||||| |||||
Sbjct 46869 GGAGTCCGGCGCAATCGGACGCGCTATCGTACCATCCGGTGCATCCACTGGTGCCCACGA 46928
Query 1809 AGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGC 1868
||| || || ||||| ||||| |||||| | |||||| ||| ||| || ||||
Sbjct 46929 AGCCGTTGAGCTTCGCGATGGCGACAAATCCCGTTACCTGGGTAAAGGTGTTCTGCAAGC 46988
Query 1869 AGTTGATAACGTAAACAACGTTATTGCTGAGCACATCATCGGATTCGACGTACGTGATCA 1928
||| | ||||||||| | || ||| | | ||||| | || | | |||||
Sbjct 46989 TGTTAAAAACGTAAACGAAACAATCGCTCCAGAAGTAATCGGTATGGATGCATTGGATCA 47048
Query 1929 ACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGG 1988
|| ||||| ||| |||||| || | || ||||| ||||||||||||||||| ||
Sbjct 47049 ACTGGGTATCGACAAATTGATGATCACTTTGGATGGTACGCCAAACAAAGGTAAACTGGG 47108
Query 1989 TGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGA 2048
||| ||||| || || | ||| || || |||||||| || |||||||||||| || ||
Sbjct 47109 TGCTAACGCAATCCTGGCTGTATCCATGGCTGTAGCTCGTGCAGCTGCTGACGCTCTGGA 47168
Query 2049 AGTTCCACTTTACAGCTACCTTGGCGGATTCAACACTAAAGTTCTTCCAACTCCAATGAT 2108
| ||| | ||| ||||| |||||||||||| ||||||| |||||| ||||||||
Sbjct 47169 CCTGCCATTGTACGTTTACCTGGGCGGATTCAACGCTAAAGTACTTCCAGTACCAATGAT 47228
Query 2109 GAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAATTTATGAT 2168
||||||||||||||||||| || | ||| |||| | ||||| || ||| |
Sbjct 47229 GAACATCATCAACGGTGGTGAGCATGCTGACAACAACATCGACGTTCAAGAGTTCATGGT 47288
Query 2169 TGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCA 2228
| | |||| ||| ||||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct 47289 TCTTCCTGTTGGAGCACCAAGCTTCAAAGAAGCTCTTCGCGTAGGTGCAGAAATCTTCCA 47348
Query 2229 CGCGCTTAAGAAAATCCTTAAAGAAC----GTGGACTTGAAACAGCCGTAGGTGACGAAG 2284
| || |||||| || || | || || | ||||| |||||||||||||
Sbjct 47349 CAACCT----GAAATCCGTACTGAGCTCCAAAGGCCTGAACACAGCTGTAGGTGACGAAG 47404
Query 2285 GTGGTTTCGC-----ACCTCGTTTCGACGGAACTGAAGATGGTGTTGAAACTATCATCAA 2339
| || ||||| |||| | ||| |||| ||||| | | || |||||| |
Sbjct 47405 GCGGCTTCGCACCGAACCTTGGTTC----GAAC-GAAGAAGCAATCACTACAATCATCGA 47459
Query 2340 AGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGGACTTGACTGTGC 2399
||| || ||| || || || |||||| |||||||| | || | ||| ||
Sbjct 47460 AGCGATTGAAAAAGCAGGTTACAAACCAGGCGTTGACGTATTCCTGGGTATGGACGTAGC 47519
Query 2400 ATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACTAAATTTGAAGGTGA 2459
|| |||| |||||| | ||| ||||| ||||| | ||| || ||
Sbjct 47520 TTCCACTGAGTTCTACAA---AGATGGTAAA---------TACAC---ACTTGCTGGCGA 47564
Query 2460 AGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAATTGGTTAACAA 2519
||| || | | ||| | || || | | ||| || | || |||| | ||
Sbjct 47565 AGGTAAATCT-TAC--ACTTCCGCTGAGTATGTTGACCTTCTGGCTTCATGGGTTGAGAA 47621
Query 2520 ATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATC 2579
|||||| ||||||||||| ||||| |||||| |||| |||||||||| ||||||||||
Sbjct 47622 ATACCCTATCATCACTATTGAAGACGGTATGTCCGAAGACGACTGGGATGGTTGGAAATT 47681
Query 2580 TCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAA 2639
|| || ||| | || | ||||| ||| | |||||||| ||||| |||||||| ||
Sbjct 47682 GCTCACAGAAAAATTGGGAGACAAAGTACAACTCGTTGGTGATGACTTGTTCGTAACGAA 47741
Query 2640 CACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGT 2699
||| | || | | |||||| | |||| | |||||| ||||| ||||||||
Sbjct 47742 CACAGAGCGTCTGGGTAGAGGTATCGAAGAAGGTATCGGTAACTCCATCCTGATCAAAGT 47801
Query 2700 TAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGG 2759
||||||||||||||| ||||||||||| ||||| || ||||||||||| ||| || ||
Sbjct 47802 TAACCAAATCGGTACATTGACTGAAACATTTGATGCAATCGAAATGGCTAAACGCGCAGG 47861
Query 2760 ATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATAT 2819
|||||| || ||| | || |||||||| ||||| | ||||| ||||||||||| ||
Sbjct 47862 ATACACTGCTGTAATCTCTCACCGTTCCGGTGAGTCCGAAGACAGCACAATCGCTGACAT 47921
Query 2820 TGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTAT 2879
|| |||||||| ||||| |||||||| || || ||| | || ||||| ||||||||
Sbjct 47922 CGCTGTTGCAACAAACGCGGGTCAAATCAAAACGGGTGCTCCTTCCCGTACAGACCGTAT 47981
Query 2880 TGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATACCG 2939
|| || |||||||||||||| || ||||| || ||||| |||||| | || |||||
Sbjct 47982 CGCGAAGTACAACCAATTGCTCCGCATCGAGGATCAACTGGGTGAACTGGCTCAATACAA 48041
Query 2940 TGGTTTGAAATCATTCTACAACTTGAAAAAATAA 2973
|||| | ||| ||||||||| | |||||||||
Sbjct 48042 TGGTCTTAAAGGTTTCTACAACCTCAAAAAATAA 48075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156031846094628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |