Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq2217 100 4e-16 >seq2217 Length=1057156 Score = 100 bits (110), Expect = 4e-16 Identities = 198/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 196807 GGATATGTTCCTCGGTGTACCGTTCAACATCGCGTCTTACGCATTGCTGATTCACATGGT 196866 ||||| |||||| || | || || ||||| || || |||||| ||| || ||| | Sbjct 566391 GGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGAT 566332 Query 196867 GGCGCAACAGGTTAACATGGTACCGGGCGAGTTCGTTTGGACTGGCGGTGACGTCCACAT 196926 || || ||| | | | | | ||| |||||| | ||| | || || || || ||||| Sbjct 566331 TGCCCAGCAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACACAT 566272 Query 196927 CTACTCCAATCACATGGAACAGGTAGAAGAACAGCTGTCTCGTAAACCGAAAGCGTTGCC 196986 |||||| || || ||||||| || || ||| || ||| |||| | || ||||| Sbjct 566271 CTACTCAAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCC 566212 Query 196987 GACGCTGGTTATCAAACGCAAACCGGACAGTATCTTCGATTACAAATTCGAAGACTTCGA 197046 | ||||| ||||| || || ||||| || || ||||| | || ||||| || || Sbjct 566211 TAAACTGGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGA 566152 Query 197047 ACTGGTAGGCTACGATCCGCATCCGGCGATTAAAGCCCCGGTGGCTATTTAAG 197099 | | |||| | | ||||||| |||||||||||| | || | |||| Sbjct 566151 GTTTGAGAACTACCAGCACCATCCGGGTATTAAAGCCCCGATTGCAGTATAAG 566099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771508288181640