Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07- 28] 218 sequences; 30,882,610 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq54 277 3e-72 >seq54 Length=598618 Score = 277 bits (306), Expect = 3e-72 Identities = 201/229 (88%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 407301 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 407358 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 407359 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 407418 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct 407419 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 407478 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407479 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 407527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998411870