Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07- 28] 218 sequences; 30,882,610 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq54 843 0.0 >seq54 Length=598618 Score = 843 bits (934), Expect = 0.0 Identities = 584/656 (89%), Gaps = 7/656 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406440 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 406381 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406380 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 406321 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406320 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 406261 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 ||||||| || | || || |||| | | ||||| |||| || | | |||| Sbjct 406260 CAGACTTCGTAGC-GATGTTCCGCCGGTCTTCTGACCGGTCTACTCATC-GTCGCGAGGC 406203 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 || |||| || |||| | |||| ||| || ||||||| || || ||||| |||| Sbjct 406202 CAACATCGTCTGGGGCCGCTGGAT-AAGACCTAAGGAATGTAGCTTCCCTCGGGAAGTGT 406144 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||||| | |||| |||| || | || | |||||||||||| |||| |||||| | Sbjct 406143 TATAGCCTGTGGTG--ATGCAGCGTGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGTT 406086 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 406085 GGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGC 406026 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507 ||||||| ||||||||||||| | ||||||||||||||||||||||||||||| | | Sbjct 406025 GAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAAGC--GCA 405968 Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 405967 AGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTT 405908 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405907 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 405848 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 405847 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 405792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995323900