Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236615.1_202017-07-
28] 174 sequences; 30,259,387 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq41 843 0.0
>seq41
Length=789771
Score = 843 bits (934), Expect = 0.0
Identities = 584/656 (89%), Gaps = 7/656 (1%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416303 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 416244
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416243 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 416184
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416183 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 416124
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267
||||||| || | || || |||| | | ||||| |||| || | | ||||
Sbjct 416123 CAGACTTCGTAGC-GATGTTCCGCCGGTCTTCTGACCGGTCTACTCATC-GTCGCGAGGC 416066
Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327
|| |||| || |||| | |||| ||| || ||||||| || || ||||| ||||
Sbjct 416065 CAACATCGTCTGGGGCCGCTGGAT-AAGACCTAAGGAATGTAGCTTCCCTCGGGAAGTGT 416007
Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387
||||||| | |||| |||| || | || | |||||||||||| |||| |||||| |
Sbjct 416006 TATAGCCTGTGGTG--ATGCAGCGTGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGTT 415949
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 415948 GGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGC 415889
Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507
||||||| ||||||||||||| | ||||||||||||||||||||||||||||| | |
Sbjct 415888 GAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAAGC--GCA 415831
Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 415830 AGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTT 415771
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415770 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 415711
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 415710 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 415655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996267700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |